Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4343 |
Symbol | |
ID | 4178827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008242 |
Strand | - |
Start bp | 245103 |
End bp | 245999 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638059238 |
Product | TrbL/VirB6 plasmid conjugal transfer protein |
Protein accession | YP_665960 |
Protein GI | 110347142 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACCG TCTTCGGCTT TCTCGATCGC CAGTTCACGA CGCCGCTCCA GAACTTCATC AGTTCCGGTA CAAGCGGGAT CAGCGCGTGG GTGACGGGGC CGTTGACAGC AGCGCTGACA CTCTACGTGA TCCTTTACGG TTTCCTGATC CTGCGCGGAT CGGTGCAGGA ACCGATCATG GAGTTTGCCT TCCGGGCGAT AAAGCTCGCC ATCATACTGA TGCTGGTGAG GAACGCCGGC GAATATCAGA CCTATGTGAC TAACGTCTTT TTCGAGATTC TGCCCAGGGA AGTTTCCGAA GCACTGAATA CCGGCGGCGC GCCGAGCGCT ACGACCTTCG ACAGTCTGCT CGACAAGGGT CAGAAATCCG CCAATGATAT TTGGGCACAG GCCTCATGGC CGGTCGATCC GCTGACCGGT TTTGCCGGTC TTGTCGTCGT GTTTGTGACT TTTGTCGTGG CCTCGATCGG CTATGTTGTT TCACTCTATG CGCGGGTCGC CCTTGCGATC GTTCTCGCGA TCGGACCGAT CTTCATCGCA CTGGCCATGT TCCAGTCGAC ACGCCGCTTC ACCGAGGCGT GGATCGGGCA GCTCGCCAAC TTCGTCATTC TGCAGGTTCT GGTTGTCGCG GTCGGCTCGC TGCTGGTCAC CAGCTTCGCG ACCATGTTTA CGACTGTCGA GGCTTACAGC GACGTCCTGA TGCGCCCGAT CGCCGTCGGC GCCATCGGGC TTGCGTCACT GTACGTCTTT TATCAGCTGC CAGGTATTGC CTCGGCGCTC GCCTCCGGCG GTGCCTCGCT GACCTATGGC TATACCGCGG CGCGCGATGG GCACAACAAC ACCGTAGTGC GCGCGATCGG TTGGAGTTGG CGCAGGCTGA CCGGCAGAGG AGCCTGA
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Protein sequence | MYTVFGFLDR QFTTPLQNFI SSGTSGISAW VTGPLTAALT LYVILYGFLI LRGSVQEPIM EFAFRAIKLA IILMLVRNAG EYQTYVTNVF FEILPREVSE ALNTGGAPSA TTFDSLLDKG QKSANDIWAQ ASWPVDPLTG FAGLVVVFVT FVVASIGYVV SLYARVALAI VLAIGPIFIA LAMFQSTRRF TEAWIGQLAN FVILQVLVVA VGSLLVTSFA TMFTTVEAYS DVLMRPIAVG AIGLASLYVF YQLPGIASAL ASGGASLTYG YTAARDGHNN TVVRAIGWSW RRLTGRGA
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