| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4340 |
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| Symbol | |
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| ID | 4178520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008242 |
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| Strand | - |
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| Start bp | 243254 |
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| End bp | 244111 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638059235 |
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| Product | conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_665957 |
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| Protein GI | 110347139 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0413275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGAAAAC GATCGTTCCT TGCCGTGGCC ATCATCGCGG CACTGACCGC ATTCCCTGTT
CAGACCCTGG AGATTCCGAC CAGCGCGCAG CAGGACAATC GCGTGCGTTT CGTCAGCTAC
CAACCCTACA ATATCACCCG CATCGTCGGC ACGATCCGTT CTTCGGTCCA GGTGGAGTTC
GCGCCAGACG AGGAAATCGC TCATGTGGCA CTCGGCAATA CCGTTGCCTG GGAAGTCGCA
CCTGCCGGCC ACATCCTGTT CCTCAAACCA CGCGAGAACC AACCCGCCAC CAACATCTCG
GTTGTGACGA CACGGCGCGA CGGCTCCAAG CGCAGCTATC AGATGGAATT GGTCGTTCGA
GACGGGTCGG TCGATGCCGG GCAAAATACC TATTTCTATG TGAAGTACCG TTATCCAGCC
GATGAAGCAG AGCGGCGACG CCTCGAGGAT GAGGCGAAGA AGCGTGCGGC CGAGGCTGGT
TATGCCGATC AGGTCCTCGG CATCCATGAA CAATACGGCC CACGAAACTG GCGTTATTCG
GCGCAAGGCT CCGCCGCAAT CGAACCGCAG GCGGTCTACG ATAATGGCAA GGTGACGACC
TTTGCCTTCA GCGGCAATCA GGAGATGCCC GCGATCTACA TAGAGAATTC CGACGGGACG
GAAAGCCTGG TGCCGAAGAC GGTTCAGGGC GACCTCGTTC TGGTCCATGC GATCAGCCGC
AAGTTTATCC TGCGGCGTGG ATCGGACACG CTCTGCATCT TCAACGAGGC CTATTCGCCG
GTAGGCGTCG ATCCGGGAAC CAATACCACC TCGCCCTCGG TCGAACGAGT GGTGAAGGTT
CCGGCCGCCG GACAATAA
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| Protein sequence | MRKRSFLAVA IIAALTAFPV QTLEIPTSAQ QDNRVRFVSY QPYNITRIVG TIRSSVQVEF
APDEEIAHVA LGNTVAWEVA PAGHILFLKP RENQPATNIS VVTTRRDGSK RSYQMELVVR
DGSVDAGQNT YFYVKYRYPA DEAERRRLED EAKKRAAEAG YADQVLGIHE QYGPRNWRYS
AQGSAAIEPQ AVYDNGKVTT FAFSGNQEMP AIYIENSDGT ESLVPKTVQG DLVLVHAISR
KFILRRGSDT LCIFNEAYSP VGVDPGTNTT SPSVERVVKV PAAGQ
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