Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4067 |
Symbol | |
ID | 4181640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4376316 |
End bp | 4377272 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638069963 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_676599 |
Protein GI | 110636391 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.548232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGGCT TGAACAGGAA ACATGTGGCC GCCGCAGCTG TGGCGCTCGG GCTCGGATTC CATCCGGCTG CCGCCGGCGC GCAGGAATTC GTCAATGTGC TCACGGGCGG CACGTCCGGC GTCTATTATC CGCTCGGCGT CGCGCTCTCC AAGATCTACG GCGAAAATAT CGAGGGTGTT CGCACGCAGG TGCAGGCGAC CAAGGCTTCG GTGGAGAACC TCAACCTTCT GCAGCAGGGC AGGGGCGAGA TTGCCTTTTC GCTCGGCGAT TCCGTCAAGG CCGCCTGGGA GGGGCAAGAG GAAGCCGGCT TCCCGCAAAA GCTCGACAAG CTCAGGGCCA TCGCGGCAAT CTATCCGAAC TACATCCAGA TCGTGGCATC CGAGGAGTCG GGCATCGAGA ACCTAGAGGG CCTGAAGGGC AAGAGCCTGT CAGTCGGCGC GCCCAAATCC GGTACGGAGC TCAATGCGCG CCAGATCTTC GAGGCTGTAG GCATGAGCTA TAACGATCTG TCGAAGACGG AATATCTGCC CTTCGGCGAA TCCGTCGAAC TTATGAAAAA TCGGCAGCTC GACGCCACCC TCCAGTCGGC GGGCCTCGGC GTGGCCTCGA TCAAGGATCT GGCGGTTTCC ATGCCGATCA ACATGGTGGC CGTTCCCGCT GAAGTCGCCG AGAAACTCGG CGCGCCTTTC CAGTCGGCGA CGATTCCGGC CGGTACGTAT GAGGGCCAGA CGGAGGACGT CCCGACGCTT GCCGTCACCA ATATCCTCGT CACGCATTCG GATGTCTCAG ACGAGGTGGC CTACCAGATG GCCAAGCAGC TTTTCGAGAA TCTGGATGAG ATGACGGCCG CCCACGCCGC CGCCAGGGAC ATCTCGCTCG AAAACGCTGC CAAGGCCCTT CCGATTCCGC TGCACCCCGG CGCGGAACGG TATTATAAGG AAAAGGGTCT GCTCTAG
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Protein sequence | MIGLNRKHVA AAAVALGLGF HPAAAGAQEF VNVLTGGTSG VYYPLGVALS KIYGENIEGV RTQVQATKAS VENLNLLQQG RGEIAFSLGD SVKAAWEGQE EAGFPQKLDK LRAIAAIYPN YIQIVASEES GIENLEGLKG KSLSVGAPKS GTELNARQIF EAVGMSYNDL SKTEYLPFGE SVELMKNRQL DATLQSAGLG VASIKDLAVS MPINMVAVPA EVAEKLGAPF QSATIPAGTY EGQTEDVPTL AVTNILVTHS DVSDEVAYQM AKQLFENLDE MTAAHAAARD ISLENAAKAL PIPLHPGAER YYKEKGLL
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