Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_4043 |
Symbol | |
ID | 4181305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 4350426 |
End bp | 4352891 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638069939 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_676575 |
Protein GI | 110636367 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCGG ACGCTAAACT GCTCCCCGAG CTACCGGTAA GCGCCGTGCT ACCGGCGCTG AAGGAAGCGC TGGAGCGTGA GGGGAAGGCT GTGCTCGTCG CCCCGCCGGG TGCCGGCAAG ACGACGCTCG TGCCACTTGC GCTACTCGAT GAAACGTGGA GCGCTTCGGG CAAGATCGTA CTGCTTGAGC CTCGGCGTCT CGCCGCCCGT GCCGCGGCGC GGCGGATGGC TGCGCTTCTC GGCGAAGAGC CCGGCGGCAC AGTTGGCTAT GCCATGCGCA TGGAGCGGAA GGTTTCCGCG CGCACCCGCA TCCTCGTGGT TACGGAAGGC GTGCTCGCCC GCATGATCAT TGACGACCCG GCGCTGGAAG GCGTCTCGGC GGTCATCTTC GACGAGTTTC ATGAACGCGC GCTCGACGGC GATTTCGCAT TGGCCTTGGC GCTGGACGTG AAGGGAGTGC TCCGGCCTGA CCTGCGCCTC ATCGTCATGT CCGCCACGCT CGACGGCGCG CGGGTGGCGA GCCTGCTCGA CGGCGCGCCG GTGCTTGAAA GCGAGGGACG CAGCTTTCCC ATCGAGGTAC GCTATGCCGA GCGCGCGCCG GATACCGCGA TAGAGGAGGC GGTAGCCAGC GCGGTGCGGC AGCTCATTGC GGAGGGAGAC GGCAGCGTTC TCGCCTTTCT GCCCGGCCAG CGCGAGATCG CCCGGACACA GGAGCTCCTT TCGGGCAGGT TGCCTCAAAA TGTGGATCTT GCGCCGCTGC ACGGCGGTCT CGAAGGCCCT GCGCAGGATG CCGCAATCCG GCCGGCAGCA CCGGGCCAGC GAAAGGTGGT GCTCGCGACA GCAATTGCCG AGACCTCCGT CACCATCGAT GGAGTGACAG CCGTGGTGGA CAGCGGGCTT TCGCGGCTTC CCAAATACGA GCCCGACACG GGACTTACGC GGCTCGAGAC GGTGCGCGTC TCCCGCGCTT CGGCAGACCA GCGCGCCGGC CGCGCCGGGC GCACGGCGCC GGGCATTGCG CTCCGGCTCT GGCGTAAGGA GCAGACGGCC GCACTGCCCG CCTTCACCCC GCCAGAGATC CTGGAAGCGG ACCTTTCGGG CCTGCTGCTC GACTGTGCCG CCTTCGGCGT CACAGATCCC ACGACGCTCG CCTTTCTCGA CCCGCCGCCC GAGCCGGCAT TGAACGAAGC GCGGGCGCTA ATGAAGACGC TCGGCGCATT GGACGAGGCC GGCAGGCTGA CGCCCGAGGG GACGGCCATG CGGCGGCTGG CGCTGCCGGT GCGGCTTGCG CATATGGTCA CCGTCGCCGC GGCCAAGGGG CAGGCTAGCG CGGCGGCGAG GCTTGCCGTG ATTGTTTCCG AGCGAGGGCT CGGCGGCAAC AGCATCGACC TCGACGAAAG GCTCTCGCGT TTCTCAACGG ACCGCTCGCA GCGCGGCAAG GCGGCGCGGG CGCTGGCAGA CCGGCTGGCG GAAGCGGCGG GTGGTCGCAA AGACGAGGTT GGTTGTGCCG CCGGCCCACT TCTCCTGCAT GCCTGGCCGG ATCGCGTGGC AAAGGCGCGC GGCGAATATG GACGTTTCGT GCTCGCCAAT GGGCGCGGCG GACAGGTAGA CCCCGGCGAG CGGCTTGCTC GCGAGCCCTA TCTGGTCGTA GCCGACCTGC AGGGCAAGGC GCGCAACGCC CGTATCGCCG CGGCCGCCGC CATCAGCGAA GCTGAAGTGA TCGAGGGCCT AGGGCAGCGG ATCGAGACCC ATACCGAGAC CGTATTCGAC CGCGAGAAAG GCACCGTGCG CCAGCGCGAA ACGAGGCGGC TTGGCGCCAT TGTCCTCGGT GAGCGTGCGC TGCCGGCGCC GAAAGGACAG GAGGCCGATC AGGCAATTCT CGACGCGGTG CGGGAGCATG GACTTGCAAT CCTGCCGTGG AGCAAGGAGT CGATAAGTTT GCGCGCGCGC CTTGCCTTTC TGCACGCGGC GGAGGGGGAG CCCTGGCCGG AGCTTTCAGA CGAGGCGCTT CTTGCCCGGC TGGAAGACTG GCTGCTGCCT TATCTGCGCG GCGAGCCGTC GCTTTCCGCC ATATCCGGCA GTGCGCTCGC GGAAGGGCTG ATGGCGCTCG TGCCCTATGA CCTGCAGCGG AAGGTCGACG CGGAGACGCC CAGCCATTTC ACGGCGCCGA CGGGAAGCCG GGTGCCGATC CGCTACGAGA ATGGGGAGGC GGTGCTGGCG ATCCGGGTTC AGGAGCTTTT CGGGCTGAGG GAGCATCCCA CTGTGGGGAA TGGCGTCCCG CTCACGCTGG AGCTTCTCTC GCCAGCGCAC CGGCCGATCC AGAAGACGCG CGACCTGCCC GGCTTCTGGC GCGGCACATG GGCCGATGTG AGGGCGGATA TGCGCGGCCG CTATCCCAAG CATGTATGGC CGGAGAATCC GGCCGAAGCA GCGCCGACAA ACCGCGCGAA GCCGCGGCAA AAATAA
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Protein sequence | MSADAKLLPE LPVSAVLPAL KEALEREGKA VLVAPPGAGK TTLVPLALLD ETWSASGKIV LLEPRRLAAR AAARRMAALL GEEPGGTVGY AMRMERKVSA RTRILVVTEG VLARMIIDDP ALEGVSAVIF DEFHERALDG DFALALALDV KGVLRPDLRL IVMSATLDGA RVASLLDGAP VLESEGRSFP IEVRYAERAP DTAIEEAVAS AVRQLIAEGD GSVLAFLPGQ REIARTQELL SGRLPQNVDL APLHGGLEGP AQDAAIRPAA PGQRKVVLAT AIAETSVTID GVTAVVDSGL SRLPKYEPDT GLTRLETVRV SRASADQRAG RAGRTAPGIA LRLWRKEQTA ALPAFTPPEI LEADLSGLLL DCAAFGVTDP TTLAFLDPPP EPALNEARAL MKTLGALDEA GRLTPEGTAM RRLALPVRLA HMVTVAAAKG QASAAARLAV IVSERGLGGN SIDLDERLSR FSTDRSQRGK AARALADRLA EAAGGRKDEV GCAAGPLLLH AWPDRVAKAR GEYGRFVLAN GRGGQVDPGE RLAREPYLVV ADLQGKARNA RIAAAAAISE AEVIEGLGQR IETHTETVFD REKGTVRQRE TRRLGAIVLG ERALPAPKGQ EADQAILDAV REHGLAILPW SKESISLRAR LAFLHAAEGE PWPELSDEAL LARLEDWLLP YLRGEPSLSA ISGSALAEGL MALVPYDLQR KVDAETPSHF TAPTGSRVPI RYENGEAVLA IRVQELFGLR EHPTVGNGVP LTLELLSPAH RPIQKTRDLP GFWRGTWADV RADMRGRYPK HVWPENPAEA APTNRAKPRQ K
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