| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_4002 |
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| Symbol | |
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| ID | 4181149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 4308903 |
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| End bp | 4309892 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638069898 |
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| Product | type II secretion system protein |
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| Protein accession | YP_676534 |
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| Protein GI | 110636326 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0289268 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATG TGGTCACGAC CCTCACCGAC CCGAGCTTCC TTCTGGCGCT CCTCGTTTCG
ATCGCGGTAT TCGCTACGAT CTTCACCGTG GTTCCCGTCG GCGGAGGAGA TCCGCTCAAG
GCGCGGATGA AGACCGTGGC CCTGGAGCGG GAGGAGCTGC GCGCGAAACA GCGGGCACGC
CTTGCCGCTG AGGCGGAGCG CCGGCGGGCC GGAGGTCTGC GCCGGGAAGA CCGCTCCTCC
ATGCGCGCCA TCGTGGACCA ACTGGATCTC AGGCGCGCTT TGGCCGACGA GTCTACTGTC
GCCATGTTGC GAACGGCTGG TTATCGCGGG CAGAGCCCGC TCACCCGATT CCTGTTCTTC
CGACTCGTCC TGCCTCCCGC TGGCTTGATG CTCGCCCTTT TCTACATATT CGTCATGGGC
GGTCTTGCCG CGCAGTCGCT CCCGATCCGC ATCTTTGTCT GCATCCTGGC CGCTTATGGG
GGGTTCTACC TGCCGGTCCT CTATATTTCC AACCAGGCAA GCAAGCGGAA GAAGTCCATC
CAGCTTGCAT GGCCCGATGC CTTAGACTTG CTGCTCATCT GCGTCGAATC GGGTGTTTCG
GTGGAACAGG CTTTCCGGCG CGTGGCAGAC GAGATTGGAA CGCAGTCGGT GGCGCTCGCC
GAGGAGTTAG TGCTCACAAC CGCCGAACTC TCGTTTCTGC AGGAGCGGAG ACAGGCCTAT
GAGAATCTGG CCGCCCGCAC AGGTCTTGAA TCCGTAAAGA GCGTTTCCCA GGCGCTGATT
CAGGCCGAAC GTTACGGCAC TCCCATAAGC CAGGCGCTGC GCGTGCTGGC CGATGAAAGC
CGCGAAGCGC GCATGAACGC GGCCGAGAAA AAGGCAGCAG CCCTGCCGCC CAAACTGACG
GTGCCGATGA TCCTATTTTT CCTGCCGGTG CTTTTTGCGA TCATTCTCGG GCCGGCGGCG
ATCCAGCTTT CAAAGGACGG ATTGTTCTAA
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| Protein sequence | MTDVVTTLTD PSFLLALLVS IAVFATIFTV VPVGGGDPLK ARMKTVALER EELRAKQRAR
LAAEAERRRA GGLRREDRSS MRAIVDQLDL RRALADESTV AMLRTAGYRG QSPLTRFLFF
RLVLPPAGLM LALFYIFVMG GLAAQSLPIR IFVCILAAYG GFYLPVLYIS NQASKRKKSI
QLAWPDALDL LLICVESGVS VEQAFRRVAD EIGTQSVALA EELVLTTAEL SFLQERRQAY
ENLAARTGLE SVKSVSQALI QAERYGTPIS QALRVLADES REARMNAAEK KAAALPPKLT
VPMILFFLPV LFAIILGPAA IQLSKDGLF
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