Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3806 |
Symbol | |
ID | 4182621 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 4113050 |
End bp | 4114405 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638069698 |
Product | phage integrase |
Protein accession | YP_676338 |
Protein GI | 110636130 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0304559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAC TGACCAAACG AATTGTCGAA TCCGCCGAGG TTCGCGAGAA GGACTACTTC GTCTGGGACG ACGAACTGCC GGGCTTCGGC CTGCGCGTTT TCGCATCTGG CAAACGCAGC TATCTCATTC AGTATCGAGC CGCCGGTCGC ACCCGGCGCT TCACCATCGG GCTTCATGGA ATCTGGACGG CCGAGAACGC TCGGCAAGAG GCCAAAGCCC AACTCGGCCG AGTCGCACGC GGCGAGAATC CCTCCGAAGA ACGCCAGCTC GACCACAAAG CAATCACGGT GAAAGAACTC TGCACTCTCT ATCTGAATGA CATGAACGCC GGCCTCATCA TGGGAAAAGG CGGTCGACCA AAGAAGCCTA CGACGATAGT GACCGATACG GGGCGCATCA ACCGGCACAT CATTCCGCTT CTCGGCGCCC GCCGAGTGAA GGATCTCGCC AAGGCCGACG TAAACAAGCT CCTCAAAGAC GTCATGGCGG GTAAGACCAG GGTTTCGGTC AAGACCGACA AGCTACGGGG AAAGGCTATC GTGCGCGGCG GTGCGGGAAC CGCCGCGCGA ACCGTCAGTC TTCTTGGCGG CATCCTCACC TACGCCGTAG ATGCCGGCAT CATAGACCGC AACCCTGCGC ACGGCATCAA GAAGCCGAAA GACAATGTCC GCAAGCGTCG GCTGTCCGAC GCGGAGTATC GCATCCTGGG CGTCATGCTG CGCGAGGCAG CAGAGGACGA GAAATACGCG ATGACCGTCG AGATCATCCG CCAGATCGCC ATGACGGGTT GTCGGCGTTC AGAAATCATC TCGCTGACGT GGAACGAGGT CGACACGGAT GCGAGTTGCT TGCGTCTCAC CGATAGCAAG GAAGGCGCTT CTACCCGACC CATCGGCCTT CCGGTCATCG AATTTCTGGA AGCGCAGAAG AAGAAGGCGA CCGCAACTTA TGTGTTCCCG GGCACGCGGT CGGACGACGG CGCCTTCGGC AGCTTCCCCA ATCATTGGAA GCAGATGTTC AAGGACTCGC CCTTGGCCGG CGTCACACCG CACGTCCTGC GCCACAGCTT CGCGAGCATC GCAAACGATC TCGGCTTCAC CGAAGTCTCC ATCGCCGCAC TGGTCGGCCA CTCCAAGGGC ACCGTGACGA GCAAATATAT CCATACGCTC GACACTGCTC TCATCATGGC CGCCGATACC ATCTCCGGCT ACATTCAAGG CCTGCTCGAT GGCATTGCCT TCAAACAGAC CGCGTATGCG TTGGACCGAG ATTCCCGAAA AACGGCCCTC GCGAGGTTCC TACAGAACGC GGTCGATGAA GGTGCCGGAT CGGCCCCCGA CCAGCTCGCC GCCTAA
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Protein sequence | MAKLTKRIVE SAEVREKDYF VWDDELPGFG LRVFASGKRS YLIQYRAAGR TRRFTIGLHG IWTAENARQE AKAQLGRVAR GENPSEERQL DHKAITVKEL CTLYLNDMNA GLIMGKGGRP KKPTTIVTDT GRINRHIIPL LGARRVKDLA KADVNKLLKD VMAGKTRVSV KTDKLRGKAI VRGGAGTAAR TVSLLGGILT YAVDAGIIDR NPAHGIKKPK DNVRKRRLSD AEYRILGVML REAAEDEKYA MTVEIIRQIA MTGCRRSEII SLTWNEVDTD ASCLRLTDSK EGASTRPIGL PVIEFLEAQK KKATATYVFP GTRSDDGAFG SFPNHWKQMF KDSPLAGVTP HVLRHSFASI ANDLGFTEVS IAALVGHSKG TVTSKYIHTL DTALIMAADT ISGYIQGLLD GIAFKQTAYA LDRDSRKTAL ARFLQNAVDE GAGSAPDQLA A
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