| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3713 |
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| Symbol | |
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| ID | 4180780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 4007329 |
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| End bp | 4008639 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638069606 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_676246 |
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| Protein GI | 110636038 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000455395 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACCGG AATTCGCAAG AGGTCTCATC ATAGTGGCCG TGCTGCTGGT GCTCCTCGGG
TCGGGCATCT GGATCTTCGG GGCAATCTTC CTGATCAGTC TCGGCGGGTT GTTCTTTCTG
CAGGATTTCT CGTTCGTTCG TATAGGCACG CTAATGAAAA CCGTGTCGTG GCGCGCCCTC
ACCAGCTATG AACTGGCCTC GCTCCCGCTG TTCGTCTGGA TGGCCGAGAT TCTGTTCCGA
ACGCGACTGT CGGAGCAGAT TTTCAGAGGC GTATCGCCCT GGGTGGACTG GGTACCGGGA
AGGCTTCTCC ACGTGGTTAT CGTAGCCTGT GGATTGTTCG GAGCCGTTTC CGGTTCATCC
ACGGCCACGT GCGCGACCGG GTCCAAGATT GCCCTGCCGG AACTGCGCAA GCGTGGCTAC
GACGACGGTG TTATCATCGG CGCTCTCTCC GCGGGCGGCA CGTTGGGGAT TATGATCCCA
CCCTCGATCG CCATGGTGAT CTATGCGGTC GTCGCCGAGG TTTCACTTGT CAAGCTGATG
CTCGCCGGCT TCCTGCCCGG ATTGCTGATG ATGGGGCTCT TCTCCGGCTA CATCTGTGGT
TGGTCCGTCC TCAATCCACA TCGCACACCA GACGATCCCG AACCGATGCG ACTCATCGAG
CGGTTTGCCA GATTATTCGA ACTCGCACCA GTTGCCGTGC TGTTCATCTT CATCTTCGGC
GCGTTGTTTG CCGGCTACAT CACCGCCACC GAATGCGCGG CGTGGGGAGT GGCGGGCGCC
CTCCTGATTG CTGCGCAGCA GCGCTTGCTG ACGTGGGAGA CATTCAAGCT CAGCATACGA
GGGACGGTTC GTACCACCAG CATGCTTGTC ATGCTTATCG GCATGGCCGC CATCATGTCG
TCGTTTGTCG CCCTTGCCGG GATACCCAAC GCAATGTCGC GCGCGGTGGA CAGTCTGGGC
GTCGGCCCCT TCGGACTGGT GGCGATCCTG ATGCTGGTCT TTATCGTGCT GGGCATGTTC
CTCGACGGCA TGTCCATGAT TCTTCTGACC TTGCCGGTAA CCCTGCCGAT GGTCGTCGCC
GCTGGCTTCG ACCCAATCTG GTACGGGATT TTCCTTATTC TGATGATTGA GATTGGTGAG
CTGACCCCAC CCGTGGGCTT CAACCTCTTC GTCCTTCAGA ACATTACCGG CAAGAACATA
TTCTCGATCG GCCGGATGTC ATTTCCGTTC TTCCTGATGA TGGTCATCTG CATCTTCGTT
CTGGTGGCGT CCCCGCAAAT CGTAATGGTT CTGCCCAATC TCTATCACTG A
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| Protein sequence | MEPEFARGLI IVAVLLVLLG SGIWIFGAIF LISLGGLFFL QDFSFVRIGT LMKTVSWRAL
TSYELASLPL FVWMAEILFR TRLSEQIFRG VSPWVDWVPG RLLHVVIVAC GLFGAVSGSS
TATCATGSKI ALPELRKRGY DDGVIIGALS AGGTLGIMIP PSIAMVIYAV VAEVSLVKLM
LAGFLPGLLM MGLFSGYICG WSVLNPHRTP DDPEPMRLIE RFARLFELAP VAVLFIFIFG
ALFAGYITAT ECAAWGVAGA LLIAAQQRLL TWETFKLSIR GTVRTTSMLV MLIGMAAIMS
SFVALAGIPN AMSRAVDSLG VGPFGLVAIL MLVFIVLGMF LDGMSMILLT LPVTLPMVVA
AGFDPIWYGI FLILMIEIGE LTPPVGFNLF VLQNITGKNI FSIGRMSFPF FLMMVICIFV
LVASPQIVMV LPNLYH
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