Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3657 |
Symbol | deoA |
ID | 4179534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3948455 |
End bp | 3949771 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638069550 |
Product | thymidine phosphorylase |
Protein accession | YP_676190 |
Protein GI | 110635982 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02643] thymidine phosphorylase [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTCC CCCAGGAAAT CATCCGCAGG AAACGCGACG GCAAGGCTCT GTCGCCGGCC GATATCGCTG ATTTTGCGGC CGGTCTTGCC TCCGGCGCCT GGAGCGAAGG GCAGGTGGCC GCCCTCGCCA TGGCGGTCCT GCTCAACGGC ATGGAGCGCG ATGAAACCGT CGCGCTCACT CTTGCAATGC GCGATTCCGG CGACGTGCTC GACTGGTTGT CACTTCCCGC CCCGGTCACC GACAAGCATT CCACGGGCGG CGTGGGCGAT AATGTCTCGC TGATGCTGGC GCCCATCGTC GCCGCCTGCG GCGCCTATGT GCCCATGATA TCGGGGCGCG GGCTCGGGCA TACGGGCGGC ACGCTCGACA AGATGGACTC CATTCCCGGC TATCGCAGCC AGCCGACGCG GGAAGAGTTC GAGCGAACCG TGCGCGCCGC CGGCTGCGCC ATCATCGGCC AGACGGGAGA CCTTGCGCCC GCGGACCGCC GCTTCTACGC CATCAGAGAC GTGACCGGCA CGGTGGAATC CATCCCTCTC ATCACGGCGT CGATTCTTTC CAAAAAACTT GCCGCCGGCC TGCAGTCGTT GGTCCTCGAC GTAAAATCGG GCAACGGCGC CTTCATGGCC GAGAGGAGCG AGGCTCAGGC GCTCGCGACC AGCCTCGTGC AGGTGGCGCA GGGCGCGGGG CTATCTGCCA GCGCGCTTAT CACGGACATG AACGAGCCGC TCGCCACGGC CGCGGGCAAT GCTGTCGAGG TGCGAAACGC CGTCGATTTT CTCACGGGAG AAACACGGGA TGAGCGCCTT GAGGAGGTGA CGCTGGCGCT GGCGGCCGAG ATGCTCGTAG CCACGGGCAT CGCATCCGGT GGGGAGAATG CGTTGAAACG CGCCCGCACG GCGCTCGAAA GCGGCGGTGC GGCCGAGCGC TTTAGCCGGA TGGTCGCCGC GCTTGGCGGC CCCGCCGATT TCGTTGAGAA GATGGACCAA TATCTCCCTC GCGCGCCCGA AACGCGTGCT GTGAAAGCCG AGCGGGCGGG ATTCGTCGCC AGCATAGACA CGCGGGCGCT GGGAATTGTC GTGGTCGAAC TCGGCGGCGG CCGGCGCAGG CCGGAAGATC CAATCGACCA CGCCGTCGGC CTCACAGCCA CATTGCCCAT CGGCAGGGAA GTCCGCCGCG ACGATCCGCT GGCCGTGGTC CATGCCCGCA CGCCCGCCGA TGCCGAACGG GCAGCCGAAG CGGTCCGCCG CGCCTACCGC ATCGCCGATG AGCGGCTTTC CACGCAATCG CCTGTGCTGG AGAAGATCGC GGGCTGA
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Protein sequence | MPLPQEIIRR KRDGKALSPA DIADFAAGLA SGAWSEGQVA ALAMAVLLNG MERDETVALT LAMRDSGDVL DWLSLPAPVT DKHSTGGVGD NVSLMLAPIV AACGAYVPMI SGRGLGHTGG TLDKMDSIPG YRSQPTREEF ERTVRAAGCA IIGQTGDLAP ADRRFYAIRD VTGTVESIPL ITASILSKKL AAGLQSLVLD VKSGNGAFMA ERSEAQALAT SLVQVAQGAG LSASALITDM NEPLATAAGN AVEVRNAVDF LTGETRDERL EEVTLALAAE MLVATGIASG GENALKRART ALESGGAAER FSRMVAALGG PADFVEKMDQ YLPRAPETRA VKAERAGFVA SIDTRALGIV VVELGGGRRR PEDPIDHAVG LTATLPIGRE VRRDDPLAVV HARTPADAER AAEAVRRAYR IADERLSTQS PVLEKIAG
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