Gene Meso_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3650 
Symbol 
ID4179527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3942216 
End bp3942848 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content64% 
IMG OID638069543 
Producthypothetical protein 
Protein accessionYP_676183 
Protein GI110635975 
COG category[R] General function prediction only 
COG ID[COG5516] Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.242781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCTT CACCGGCGGA AACCTCAGAC GGTCCCGTGC CGTTCTTCTT CGGAGGGCGG 
CCCGCTCTCG ACTTCGTCAA CACTGTCGAC AACCGCGCCA GACCGGCGAA GCGGGATTAT 
CTGGCCGGCT TCCCTGAAAT CCTGGGCTGG TGCGGGCAGA CACGGCTCTT CGCTCCTGCT 
GCCCTGGAGC GCCTTGCAGC GCGGGCTCTC GCCGCCCCTG AGGAGTCGGC GCAAATGCAT 
CGCGCCGCAA TCGTCTTGCG TGAGGCGCTT TACCGGATTT TCCGCAGCGC CATTGAGAAA 
ACGCCTGTGC CGGAGGCCGA TTTGTGCCTT CTCAATGATT GGCTGCGCGA GGCTCGCGGG 
CGGCAAATTC TGGCTGCAAC AGGCGGGAAC TTCCGATGGG TAGAAGACGA AACGAGGCTC 
GACCTCAGGT CTCCGGCTTT GGCGGTCGCG CTTTCCGCCG CAGATATGCT GACGCGGGAA 
GACGTGAAGC GACTGAAGGA GTGCCCCGCG CCCTATGGCT GCGGCTGGCT TTTCTATGAC 
GAAACGAAGA ATGCTTCGCG CCGCTGGTGC AGCATGGAGC ATTGCGGCGC AGCCGCCAAG 
GCGCGACGCT ATGCCGAGCG CCACCGCCGC TGA
 
Protein sequence
MSPSPAETSD GPVPFFFGGR PALDFVNTVD NRARPAKRDY LAGFPEILGW CGQTRLFAPA 
ALERLAARAL AAPEESAQMH RAAIVLREAL YRIFRSAIEK TPVPEADLCL LNDWLREARG 
RQILAATGGN FRWVEDETRL DLRSPALAVA LSAADMLTRE DVKRLKECPA PYGCGWLFYD 
ETKNASRRWC SMEHCGAAAK ARRYAERHRR