| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3632 |
|---|
| Symbol | |
|---|
| ID | 4181979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3922334 |
|---|
| End bp | 3924409 |
|---|
| Gene Length | 2076 bp |
|---|
| Protein Length | 691 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638069526 |
|---|
| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_676166 |
|---|
| Protein GI | 110635958 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.208084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATACAGC AGCGCCTGCC AACCGGCACG CCGATCCCCC TGCCCGACGC CACCCTTTGC
GTGGACGGGC TCAGCATCAG CTATGGCGCC GCCAAGGTCG TCAGGGACGT GACGCTGCGC
ATCGCCCCCG GCGAGGCTTA TGGCCTAATT GGTGAAAGCG GGTCGGGCAA GTCGACCATC
GCATTCTCCG TGATGGGATA TCTTAACGGC GGCACCGCGT CCGCCGGGCG CATCACGATT
GCCGGCCACG ATATCCTGAC GCTGCCGGAC CGTAAGCTGC GAAGACTTCG CGGCCCGGTC
GTATCGATGG TCTTCCAGGA CCCCATGAAC GCGCTCAACC CGTCGATACG AGTGGGCGAG
CAGATCGCCG AGGGAATCCG CTACCACACG GGAGCCGGAA AGGCGGAGGC CGAAGCACGC
GCCATTGAGC TGATCGACCA AGTCAAGCTG CCGGAGCCCG AGGACATCGT TCGGCGCTAC
CCGCACCAGC TGTCCGGCGG TCAGCAGCAG CGTATCGTCA TCGCAATGGC GCTGGCGCTG
GAGCCCGCCT TGCTGATTCT CGACGAGCCG ACCACTGGGC TGGACGTCAC CACCGAAGCG
ACGATCCTCG ATCTCATCAC CGAGATAAAG CAACGCTCGA ATGTGGCGTT GCTTTTCATC
AGCCACAATC TCGGCGTTGT GGCGCGCATG TGCGACCGCG TCGGCGTGCT CTATGCTGGC
GACCTGATCG AGGAAGGACC GACAGCGGAG GTTCTGCAAC GGCCGAGTCA CCCCTACACG
CGCGGCCTCA TCAGCGCGGT GCCCAGCATC GCCGGCGAAT TGGAGATGGT AGGGATTCCC
GGCAGCCTGC CGGATCTCAC CGAGGTGCCC AAGGGCTGCA TCTTCCGCGC CCGCTGCAGC
ATCGCCATTG CGGCGTGCGG CGAAGCGCCG GTCCCGATGG AGACCGTGCG TCCAGGTCAT
GCCAGCCGCT GCCTGCGTTG GCGCGACTGC CTGGCCGAGC TGAACCCGCC ACAGGCTGCG
GCTGTGCGCG CGCCGCTCGA CGGGGAGAAA CGGCTGGAGA TAGACTCGGT AATCCGCAGC
TTCCCCGGAG CGCGGCGGCT GCCATTTCTT AAGCCCCGCC CGGCCGTCCA AGCGCTGCGT
GGCGTGTCGC TCGATATCCG GGCCGGCGAG ACGTTAGCCG TCGTAGGCGA AAGCGGCTCC
GGTAAAAGCA CCCTCGGGCG TCTGGTCGCC GGCCTTGACC GGCCAGCCGG TGGCACGATC
CGCTTCGAAG GACGGGACGT CACCGCGCTG TCGCGCGAGC GCACTGTAGA CGACCAGCGC
GCCGTGCAAT TTATCTTCCA GAATCCGCAT TCGGCACTCA ACCCGCACCA TACGGTGGAG
GAGATCGTAG GCCGGCCCCT GCGCCTCTAT CTCGGCCTAC AGGGCACGGA GCTGCGCCGT
CGGATCGTCG AGATCCTTCG CGCTGTGCGG CTCGGGGAAC GTTACATGAC CCGGGCGCCG
CACGAGCTCT CAGGCGGCGA GAAGCAGCGC GTCTGCATTG CGCGCGCCTT TGCGGCCGAG
CCTCGCCTCG TCGTCTGCGA CGAGCCGACT TCGGCGCTCG ACATCTCGGT TCAGGCTGCG
ATCCTCCAGG AGTTGCAGAC GCTCCAGCGC GAATCCGCCC ATCGCACGGC ATACATGTTC
ATCACCCACG ACCTCGGCGT CGTCCGGCAG ATCGCCGACA GGGTCGCGGT GATGTACCTG
GGCGAGATCG TCGAACTCGG CGCGACGCGC GACATCTTCA GCCGGCCTCA GCACCCCTAC
ACGGAGGCCC TGCTCGCGGC CGTGCCGGAG CTGCGTCCCA CGCGCGCCTC GCGCATGCGG
CTGCAAGGCG TTGTGCCCCG ACCGACCAAT CCGCCCTCGG GATGCTCCTT CCACACACGC
TGCCCCCGGC TCAAGGGCGA CATTTGCAGC CAGAAGGCGC CGCCGACCCG CTCGAAGGCG
AGCGGGCACG CTATGCGCTG CCATCACGAT ATCAACACAC TCAAGGCTCT GCAGAGTGCT
GAGCTAGAAA ACAGGACGGA GCCAGCGAGA CCATGA
|
|---|
| Protein sequence | MIQQRLPTGT PIPLPDATLC VDGLSISYGA AKVVRDVTLR IAPGEAYGLI GESGSGKSTI
AFSVMGYLNG GTASAGRITI AGHDILTLPD RKLRRLRGPV VSMVFQDPMN ALNPSIRVGE
QIAEGIRYHT GAGKAEAEAR AIELIDQVKL PEPEDIVRRY PHQLSGGQQQ RIVIAMALAL
EPALLILDEP TTGLDVTTEA TILDLITEIK QRSNVALLFI SHNLGVVARM CDRVGVLYAG
DLIEEGPTAE VLQRPSHPYT RGLISAVPSI AGELEMVGIP GSLPDLTEVP KGCIFRARCS
IAIAACGEAP VPMETVRPGH ASRCLRWRDC LAELNPPQAA AVRAPLDGEK RLEIDSVIRS
FPGARRLPFL KPRPAVQALR GVSLDIRAGE TLAVVGESGS GKSTLGRLVA GLDRPAGGTI
RFEGRDVTAL SRERTVDDQR AVQFIFQNPH SALNPHHTVE EIVGRPLRLY LGLQGTELRR
RIVEILRAVR LGERYMTRAP HELSGGEKQR VCIARAFAAE PRLVVCDEPT SALDISVQAA
ILQELQTLQR ESAHRTAYMF ITHDLGVVRQ IADRVAVMYL GEIVELGATR DIFSRPQHPY
TEALLAAVPE LRPTRASRMR LQGVVPRPTN PPSGCSFHTR CPRLKGDICS QKAPPTRSKA
SGHAMRCHHD INTLKALQSA ELENRTEPAR P
|
|---|
| |