Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3619 |
Symbol | |
ID | 4181216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3905010 |
End bp | 3905753 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638069513 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_676153 |
Protein GI | 110635945 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00790972 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA AAGTTCTTGT TCTTACAGGC GGTGCGTCGG GTATCGGGCG CGGCATTCTG GACCACGCGG TCAGGGCTGG ATGGCATACA GCCGTCTTCG ATCTACCCGG CGAGGCCCTG GACGCACTTC GAGATACTTT TTCGATGGAT GACGTCACGA CCTTCGGCAT CGATGTCACA GACGAGAACG CGGTCGACGC AGCGGTGCGA AAGGTTGCCG AACCATTCGA GCGCATTGAC GGGGTCGTCA ACTGCGCCGG CATCGGACAA AATATTCCTT TTAACGAGAC AACACCGGCG CAGTTTCGCA AGGTTCTCGA CGTCAATGTC ATCGGGTCTT TCATCGTAGC GCAATCAGCT GTGAGACACA TGAGCAATGG CTCGGTGGTG AACATCACCT CTGTCTCCGG AATCCAGGGC AGCGTCGGTC GTGTTGCTTA TGGTGCCTCG AAAGGTGCGG TAAACACGAT GACCCGCATT ATGGCGGTGG AACTCGCCCC TCATGGCGTA CGTGTCAATG CCATTGCTCC CGGACCCGTT GAAACGCCGA TGGCGCAGAA ATGGCACGAT GAAAAGACGA GGAACGATTG GAAATCGCGC GTTCCGCTCG GCCGGTACGC CTCAGTCGAC GAAATTGCGT CGATGGCGAT GGTTCTGCTG GACGACAATC TGTCGTCCTA TGTCAACGGT CAAGTGATCG CTGTGGACGG AGGCTTTACC GTCTCGGGTT TGATGGCACC GTAG
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Protein sequence | MKKKVLVLTG GASGIGRGIL DHAVRAGWHT AVFDLPGEAL DALRDTFSMD DVTTFGIDVT DENAVDAAVR KVAEPFERID GVVNCAGIGQ NIPFNETTPA QFRKVLDVNV IGSFIVAQSA VRHMSNGSVV NITSVSGIQG SVGRVAYGAS KGAVNTMTRI MAVELAPHGV RVNAIAPGPV ETPMAQKWHD EKTRNDWKSR VPLGRYASVD EIASMAMVLL DDNLSSYVNG QVIAVDGGFT VSGLMAP
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