Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3434 |
Symbol | |
ID | 4181479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3712884 |
End bp | 3713675 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638069328 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_675970 |
Protein GI | 110635762 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.101369 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTCTGG ACGGGAAAAC GGCGGTTGTC ACAGGCGGGG CCGGCGGGAT CGGCTATGCC GTTGCGGAGC GGTTTTTGCG AGAAGGCATG CGCGTCGTAA TCGCCGATAT TGACGGAGAA AAGGGCACCC GTTCACTGAA GAGCCTTGAG AAACTGGGCG AAGCCTGGTT TGCCAAGGCG GACGTCGGGA GGAGCCTGGA TGTCCATAAT CTGATTGCTT TCACCATTGA TGCGCTGGGG GACATTGATG TCCTTGTGAA TAATGCCGGG ATCGCTCACG GCGCAGACTT CCTCGATCTG AGGGAGGAGG ATTTCGATCG CGTTTTGCGC GTGAACCTCA AGGGCGCTTT TCTCGTCGGA CAGGCTGCGG CCCGATTTAT GGTCGAGAAG GTGCAAAATG GCGGGCCGGC CGGGGCAATC ATCAACATGT CCTCCGTCAA CGCGGTTTTC GCAATCGCCG ATCAGGTGCC CTATTCGATC TCGAAGGGCG GCGTGAACCA GCTCACCAAG GTGATGGCGC TCGCGCTTGC GCCACATGGC ATACGGGTCA ATGCGATCGG ACCCGGCTCC ATCATGACCG ACATGCTTAC GAGCGTTAAT GATGATCCAG ATGCTCGGGA ACGCATTCTC TCGAGAACTC CGCTTGGCCG CATTGGTGAT CCTCAAGAGA TCGCATCTAT TGCAGCATTC CTGGCCTCTG ACGAAGCAAG CTATATTACT GGCCAGACAA TTTATGCCGA TGGTGGACGC TTGCCGCTAA ACTACACCGT CTCCGTTCGG TCCGAGGATT AA
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Protein sequence | MALDGKTAVV TGGAGGIGYA VAERFLREGM RVVIADIDGE KGTRSLKSLE KLGEAWFAKA DVGRSLDVHN LIAFTIDALG DIDVLVNNAG IAHGADFLDL REEDFDRVLR VNLKGAFLVG QAAARFMVEK VQNGGPAGAI INMSSVNAVF AIADQVPYSI SKGGVNQLTK VMALALAPHG IRVNAIGPGS IMTDMLTSVN DDPDARERIL SRTPLGRIGD PQEIASIAAF LASDEASYIT GQTIYADGGR LPLNYTVSVR SED
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