Gene Meso_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3349 
Symbol 
ID4181726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3619224 
End bp3619823 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content62% 
IMG OID638069242 
Product2'-5' RNA ligase 
Protein accessionYP_675885 
Protein GI110635677 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGAC TTTTCACCGC CCTCGAAATT CCGCGCGATG CGGCTTTATC GCTCTCGCTC 
CTGCGTGGCG GATTGCCGGG AGCCCGCTGG ATCGATGTCG AGAATTATCA TCTGACATTG 
CGCTTCATCG GGGATGTGGA AGGCCATGTG GCCGACGAGA TCGCCAACGC GCTGGACCGG 
GTGCGCCGGC CCTCCTTCCT CCTCACTCTT TCCGGCGTTG GCGCATTCGG ACAGAAGAAG 
CCGCATTCTG TCTGGGCCGG TGTTGCGGCA TCGCCTGATC TTCAGGCGCT CCAGGGAGAA 
ATCGAGCGGA TCTGCCAACG CCTGGGCCTG CCGGCCGAGC AACGGAAGTT TACTCCGCAT 
GTGACCTTGG CCCGGCTCAA GAACGCCTCC CCACATGAGG TCGCTTCCTA TCTGTCGGCC 
CGTGGCAATT TCGCTGCGAT GCCCTTCCGG GTAAACCGCT TCGTTTTGAT GTCCTCACGG 
GATTCCGTAG GCGGCGGGCC CTATGTGGTG GAGGAGGCCT GGCCGCTGTT GCGTACCGAA 
AGCGCGCGGT CGGCAAGCTT GTCGGCCAGC GCTTCGGAAG CTTCGCGGAT CATGCGGTAA
 
Protein sequence
MPRLFTALEI PRDAALSLSL LRGGLPGARW IDVENYHLTL RFIGDVEGHV ADEIANALDR 
VRRPSFLLTL SGVGAFGQKK PHSVWAGVAA SPDLQALQGE IERICQRLGL PAEQRKFTPH 
VTLARLKNAS PHEVASYLSA RGNFAAMPFR VNRFVLMSSR DSVGGGPYVV EEAWPLLRTE 
SARSASLSAS ASEASRIMR