Gene Meso_3330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3330 
Symbol 
ID4179464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3600811 
End bp3601986 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content63% 
IMG OID638069223 
Productmajor facilitator transporter 
Protein accessionYP_675866 
Protein GI110635658 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGGAC AAAACGCGCT TTACGGCCGC TGGGCAGTTG CGGCCTTTTT CTTTGCCAAT 
GGCTTTATAA CGGGAAGCTG GGCGCCGGAA ATTCCGGTTC TGGTGGCCCG GTTTTCGCTC
ACCGAAAGCG CGCTCGGTCT CCTCATCATG GCTTTTGGCC TGGGGGCGGT CGCGGCGATG
CCCCTCTGCG GCTATCTCAT TGGCCGGTTC GGCTCGCGCC CTGTCTCGCG GGGCACAGGC
GTGCTCTGCT GTCTCTCGCT TGCTGGCATC GCGGCGGCCC CTTCCTTGCC CTTCCTGGCG
ATTGCTCTGA TTTTCTTCGG GGCCTTGCTC GGGGGCATGG ATGTGGCGAT GAACTCCAAC
GCGGTGGTGG TGGAGCGGCG CCTGCAGCGC GCGATCATGT CGTCATCCCA CGGCTTCTGG
AGCCTCGGCG GCTTTGCCGG CGCTGGCATA GGCGGGCTGA TGATCGAAAG GTGGGGCTAT
GTGGCCCATA TCTCCGCCGT TACGGTATTT GCCCTTTTGC TTGTTCTCCT CGCAATGACC
TTCCTTGTCG CCGAGAACAG GCCCGTCATA TCGGCGGGAA ATGGCAAGCG CGGCCTCCCG
CGCGGTACGC TGGTCTATAT AACCGGCCTG ATTGCCCTTT TCTGCATGAT TCCTGAAGGC
GCCGTGCTGG ACTGGGCCGC CCTCTACCTG CAACAGGAGA TGGGCGCCGA TTATTTCACT
GCGAGCCTTC CCTTCGCCGC CTTTGCGGGC GTCATGGCTG TCATGCGCTT TCTGGGAGAC
GGCGTGCGCA ACCGCCTTGG CGCGGTTACC ACCATGCGCA TTTCTGCCGG CGTCGCGGCG
ATAGGCATGC TCTGCGCAGG CTTTGCACCG AACGCTCCCG TTGCCACGCT CGCTTTCGCA
TTTGCCGGTC TCGGGGTCGC CAATATGGTT CCGATCGTCT TTTCCGCAGC CGGAAACCAG
CCCGGGATAT CTTCGGCCGC GGGCATGAGC GTGGCCACCA CGATGGGCTA TTCAGGCATC
CTTTTCGCCC CGTCCCTGAT AGGCTTTGTC GCCGAGCACA CCGGCTTCTC GCCGATCTTC
ATCGGCTTCG CTTTCGTGCT GGGCCTCGTG TTCATGATGG CCGATCTGGT ACGCCCCGCC
GATCAAATCG CCCCCCAGCC GGCACCCTCC ACCTGA
 
Protein sequence
MSGQNALYGR WAVAAFFFAN GFITGSWAPE IPVLVARFSL TESALGLLIM AFGLGAVAAM 
PLCGYLIGRF GSRPVSRGTG VLCCLSLAGI AAAPSLPFLA IALIFFGALL GGMDVAMNSN
AVVVERRLQR AIMSSSHGFW SLGGFAGAGI GGLMIERWGY VAHISAVTVF ALLLVLLAMT
FLVAENRPVI SAGNGKRGLP RGTLVYITGL IALFCMIPEG AVLDWAALYL QQEMGADYFT
ASLPFAAFAG VMAVMRFLGD GVRNRLGAVT TMRISAGVAA IGMLCAGFAP NAPVATLAFA
FAGLGVANMV PIVFSAAGNQ PGISSAAGMS VATTMGYSGI LFAPSLIGFV AEHTGFSPIF
IGFAFVLGLV FMMADLVRPA DQIAPQPAPS T