| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3244 |
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| Symbol | sdhA |
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| ID | 4181097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3511047 |
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| End bp | 3512882 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638069137 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_675781 |
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| Protein GI | 110635573 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGCTG CAGTTCAGAA CAAGGCCGGC CCGGCCTATA CTTACGTCGA TCATGTCTTT
GATGTGGTGG TGGTCGGGGC CGGTGGCGCG GGCCTTCGCG CTACGCTCGG CATGGCCGAA
CAAGGGCTGA AGACGGCCTG CATCACGAAA GTGTTCCCTA CCCGTTCACA TACCGTGGCG
GCCCAGGGCG GCATTGCCGC CTCCCTGCGC AATATGGGGC CGGACGATTG GCAGTGGCAC
CTTTACGATA CGGTGAAGGG CTCCGATTGG CTGGGCGATG TGGACGCCAT GGAGTATCTG
GCGCGCGAGG CGCCGGCCGC CATCTACGAG CTGGAGCATT ACGGGGTGCC CTTTTCCCGC
ACCGACGACG GCCGGATCTA CCAGCGCCCC TTCGGCGGCC ATATGCAGAA CTTCGGCGAC
GGCCCACCCG TGCAGCGCAC CTGCGCGGCC GCCGACCGCA CGGGCCACGC GATCCTGCAC
ACGCTCTACG GCCAGTCCGT CAAGCATCAT GCGCAGTTCT TCGTGGAATA TTTCGCGCTC
GACCTCATCA TGTCGCCGGA CGGCGTCTGC ACCGGCGTGG TGGCGTGGAA CCTGGAGGAC
GGCACCATCC ACCGCTTCGC GGCCAAGATG GTGGTGCTTG CCACGGGTGG CTATGGCCGC
GCTTATTTCT CCTGCACTTC CGCCCATACC TGCACCGGCG ACGGGAACGG TATGGTTGCC
CGCGCGGGGC TGCCGCTGCA GGACATGGAA TTCGTTCAAT TCCACCCGAC CGGCGTCTAC
GGCGCGGGCG TGCTTATCAC CGAGGGCGCG CGGGGTGAGG GCGGCTATCT CGTCAATGCC
GAGGGCGAGC GCTTCATGGA GCGCTATGCG CCCTCCGCCA AGGATCTTGC CTCGCGCGAT
GTGGTTTCAC GCTGCATGAC GTTGGAGATC CGCGAGGGCC GCGGGGTCGG ACCGAAGAAG
GACCATATCT TCCTTCATCT CGATCATCTC GACCCGGCAG TGCTGCATGA AAGGCTGCCC
GGCATTACCG AAAGCGCCCG CATTTTCGCC GGCGTCGACC TGACGCGCGA GCCGATCCCA
GTTCTGCCGA CGGTGCACTA CAATATGGGC GGCATCCCGA CCAATTATCA CGGCGAGGTG
CTCAATCCCA CGCTGGACAA TCCGGACGCG ATCGTTCCCG GCCTGATGGC GGCGGGCGAG
GCTGCCTGTG CCTCCGTCCA TGGCGCGAAC CGTCTCGGCT CAAACTCGCT AACGGACCTG
GTGGTGTTCG GCCGCGCTGC CGCCATTCGC GCCGGCATGG TGGTGGACCG CGAGTCCAAG
GTGCCGCCGA TCGACCTAGC CGCCTGCGAG AAGATCATGG ACCGCTTCGA CCGCATCCGC
CATGCAAGCG GCTCCACGCC GACGGCGGCC CTACGCGAAA AAATGCAGCG GGCCATGCAG
GAGGATGCAG CGGTTTTCCG AACCCAGGAA TCGCTCGAGC AGGGTTGCAG GCGCGTTTCG
CAAGCATGGG GTGAGCTCTC CGACATCAAG GTTCAGGATC GCTCGATGAT CTGGAACTCC
GATCTCATGG AAACGCTGGA GCTCGAAAAC CTGATGGCGA ATGCCATCGC CACCGTCTTT
TCGGCGGAGG CGCGCAAGGA AAGCCGAGGC GCACATGCGC GGGAGGACTT CACCGAGCGC
GATGACGCGA ATTGGCGCAA GCACACGCTT TCCTGGGTGG ATCCGGACGG CACCGTCCGC
CTCGACTATC GCCCGGTGCA TACTGAGCCG ATGCTGAAGC CCGAGAATGG CGGCATCGAT
CCGGCAAGGA TCGCGCCGAA GAAGCGCGTA TACTGA
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| Protein sequence | MAAAVQNKAG PAYTYVDHVF DVVVVGAGGA GLRATLGMAE QGLKTACITK VFPTRSHTVA
AQGGIAASLR NMGPDDWQWH LYDTVKGSDW LGDVDAMEYL AREAPAAIYE LEHYGVPFSR
TDDGRIYQRP FGGHMQNFGD GPPVQRTCAA ADRTGHAILH TLYGQSVKHH AQFFVEYFAL
DLIMSPDGVC TGVVAWNLED GTIHRFAAKM VVLATGGYGR AYFSCTSAHT CTGDGNGMVA
RAGLPLQDME FVQFHPTGVY GAGVLITEGA RGEGGYLVNA EGERFMERYA PSAKDLASRD
VVSRCMTLEI REGRGVGPKK DHIFLHLDHL DPAVLHERLP GITESARIFA GVDLTREPIP
VLPTVHYNMG GIPTNYHGEV LNPTLDNPDA IVPGLMAAGE AACASVHGAN RLGSNSLTDL
VVFGRAAAIR AGMVVDRESK VPPIDLAACE KIMDRFDRIR HASGSTPTAA LREKMQRAMQ
EDAAVFRTQE SLEQGCRRVS QAWGELSDIK VQDRSMIWNS DLMETLELEN LMANAIATVF
SAEARKESRG AHAREDFTER DDANWRKHTL SWVDPDGTVR LDYRPVHTEP MLKPENGGID
PARIAPKKRV Y
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