| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3146 |
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| Symbol | |
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| ID | 4183099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3415540 |
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| End bp | 3416571 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638069039 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | YP_675683 |
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| Protein GI | 110635475 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.19664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGATC CTGATAGCGA AGCTGGCGGC GGATGGAAAG AGCTGCTGGC GGATGAGAAG
GCAGAGGGCA ATCGCCTCGA CCAATGGCTG GCCGCTCGAC TTGCCCCGGA TTTCTCCCGC
AGCCGCATCC AGGCGCTCAT CCGGGAAGGT GCCGTGACCC TCAACGGACG GACCGTGGCC
GAGCCAAAGC GGAAGGTAGC GGCCGGCGAG TTCTATTGCA TTACGCTGCC CGAACCCGAG
GCCCCGGAGC CGCAAGGCGA GGACATCCCC CTCGACATTC TCTACGAGGA CGAGGCACTG
ATTGTGATCG ACAAGCCAGC GGGCCTGGTC GTGCATCCAG GGCCCGGCAA TTGGACCGGC
ACGCTGGTGA ACGCGCTGAT CCATCATTGC GGTGACACGC TCTCGGGCAT CGGCGGCGTG
CGCCGGCCTG GTATCGTCCA TCGGCTCGAC CGCGACACGA GCGGCGTAAT GGTGGTGGCC
AAGACCGACC AAGCGCACCG GGTGCTCGCG GAAGCTTTTG CGGATCACGG ACAGGACGGG
GATCTGGAGC GCGCCTATGT GGCGCTTGTC TGGGGTGTGC CGCGCCGCAT TTCCGGGTTG
GTCGACGCGC CGCTCGGCCG TTCGGCAAGC GACCGGACGC TGCGCGCGGT GGTGCCACAG
GGCCGAGCCG ATGCGCGCCA TGCGGTGACG CACTACACCG TGCTGGAACG TTATGGGACC
GGCACGCCCG AAGAGCAGAT CGCCGCGCTC GTCGAATGCA GACTGGAGAC AGGCCGCACG
CACCAGATCC GCGTCCATAT GGCGCATATC GGCCACCCGC TGGTGGGCGA CCCTGCCTAT
GGCCGCGCCT TCCGCACCAA GGCTAATCGC TTGCCTCCGG CTCTGGCAGA AATGGTCGCC
GCCTTCCCCC GCCAGGCGCT TCATGCGCGC CTTCTTGCCT TCAGGCATCC CGTATCGGGC
AAGATCATGC GCTTTGAAGC CGCAATCCCC GCCGATATGG AAAACCTGCT AAAGGGTTTT
GCGAAATTGT GA
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| Protein sequence | MSDPDSEAGG GWKELLADEK AEGNRLDQWL AARLAPDFSR SRIQALIREG AVTLNGRTVA
EPKRKVAAGE FYCITLPEPE APEPQGEDIP LDILYEDEAL IVIDKPAGLV VHPGPGNWTG
TLVNALIHHC GDTLSGIGGV RRPGIVHRLD RDTSGVMVVA KTDQAHRVLA EAFADHGQDG
DLERAYVALV WGVPRRISGL VDAPLGRSAS DRTLRAVVPQ GRADARHAVT HYTVLERYGT
GTPEEQIAAL VECRLETGRT HQIRVHMAHI GHPLVGDPAY GRAFRTKANR LPPALAEMVA
AFPRQALHAR LLAFRHPVSG KIMRFEAAIP ADMENLLKGF AKL
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