| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3043 |
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| Symbol | mdoD |
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| ID | 4180660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3316627 |
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| End bp | 3318231 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638068934 |
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| Product | glucan biosynthesis protein D |
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| Protein accession | YP_675580 |
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| Protein GI | 110635372 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3131] Periplasmic glucans biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0500489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAGGC GTTCATTCAT CATCGGAGGA GGCGGGGCAC TAGCGGGCAT GACCGCTTTT
CTGAACAATG CCGTCGCCCT TGCACAGGAT CAGGCCGAAA CGGCGCAGCT TCAGCAGTCT
CTCCCCGGGG AAACGCAACC CTTCTCGTTC GACCTCCTGA CGGCCACGAT GAAGCAGAAG
GCCGAAAAAG AATATCAACC GGTAGAGGAA GCTCTGCCGG AATCGGTGAC GGAGTTGAGC
TATGATCAGC ATCGCGCGAT CCGCTTCCGG CCCGATGCTG CCTTTTTCGC CGGCGAGGCT
CCTTTCGAAC TCCAGGCCTT CCATCCCGGC TGGCTCTTCA AGCAGCCGGT GCATCTTCAT
GTGATCGAGA ACGGCGCCGC CACGAGGATG CACATCACAT CGCAGATGTT CGAGTACCGC
CAGCCCTTGT TGGACCCGCA GAAATTTCAA GGCATGGAGT TTCCGGGCGT TGCGGGCTTC
CGGCTGCACT ATCCGCTCAA CAATCCGGAT ATCATGGACG AGCTCGTGTC GTTTCTCGGC
GCCAGCTACT TTCGGGGGTT GGGGCGGGGA AGCATCTATG GGATCTCCGC GCGCGGCCTT
GCGGTGAATA CGGCGACGCC CGTTGGCGAA GAATTTCCGA TGTTCACCGA TTTCTGGATC
GAGAAGCCGG AGCGCAGAAG CAAGTCCATC ATGGTCTATG CCGCGCTCGA TAGCGCCAGC
GTCACGGGAG CATATTCGTT CCAGATCACG CCCGGCCAGA ATACGACCAT GGAGGTGATC
GCGCGGCTCT TCATCCGCAA CGACATCCAG AGACTGGGCA TCGCGCCGAT GACCTCGATG
TTTCTTTTCA GCCAGAACAA TCATCATGCC TTCGACGATT ACCGGGGTGA GGTGCATGAT
AGCGAAGGCC TCAAGATCGT GCGGGGCAAT GGCGAGGAGC TGTGGCGCCA TCTGAACAAC
CCGAAGGAGC TCGCCACGTC CTTTTTCGGC GAAACGGGCG TCAAGGCCTT CGGTCTGTTC
CAGCGCGATC GGGACTTCGA CCACTACCAG GATGCGGAGG CGCATTACGA GCGCCGTCCG
TCGCTCCTTG TCGAGCCGCT CGGCGACTGG GGCAAGGGGT ATCTCAACCT GGTGGAGATC
CCGACAGAGC TCGAGGTGAA CGACAATATT GTCGCGTTCT GGATGCCGGA AGGGGAGGTG
AAAGCCGGCC AACAGTTCGA ATACCGGTAT CGCCTCACTT GGGGCGCGAT CGAGGAGCCG
ACGAATCAGC TCGCGCGAGT GACCGCTTTG CGCGCCGGCA TCGGCGGCAC TTCCGGCGTG
GAAAATGCAG AGGGCCTGAG GAAGTTCGTG GTGGATTTCG AGGGAGATGT GCTCGGGAAC
CTAGCCGCGG ATTCGAACGT TGAGGCCAGT ATTTCTGTGA CAAGGGCGGA AATAGTGCAC
AGCGCGGTAT CTCGTGTCGA AGCCAATGGC GCATGGCGAT TGGTCATCGA CCTCATGCCC
GAGGGAGACG CGCCGGTGGA GATGACCGGT TATTTGAGTT TGAACGGCCA GAGGCTATCT
GAAACGTGGG CGTATCAGTG GAGAAGAACC GATGAGCAGC GCTGA
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| Protein sequence | MDRRSFIIGG GGALAGMTAF LNNAVALAQD QAETAQLQQS LPGETQPFSF DLLTATMKQK
AEKEYQPVEE ALPESVTELS YDQHRAIRFR PDAAFFAGEA PFELQAFHPG WLFKQPVHLH
VIENGAATRM HITSQMFEYR QPLLDPQKFQ GMEFPGVAGF RLHYPLNNPD IMDELVSFLG
ASYFRGLGRG SIYGISARGL AVNTATPVGE EFPMFTDFWI EKPERRSKSI MVYAALDSAS
VTGAYSFQIT PGQNTTMEVI ARLFIRNDIQ RLGIAPMTSM FLFSQNNHHA FDDYRGEVHD
SEGLKIVRGN GEELWRHLNN PKELATSFFG ETGVKAFGLF QRDRDFDHYQ DAEAHYERRP
SLLVEPLGDW GKGYLNLVEI PTELEVNDNI VAFWMPEGEV KAGQQFEYRY RLTWGAIEEP
TNQLARVTAL RAGIGGTSGV ENAEGLRKFV VDFEGDVLGN LAADSNVEAS ISVTRAEIVH
SAVSRVEANG AWRLVIDLMP EGDAPVEMTG YLSLNGQRLS ETWAYQWRRT DEQR
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