Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3029 |
Symbol | |
ID | 4181504 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3302064 |
End bp | 3302897 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638068920 |
Product | short chain dehydrogenase |
Protein accession | YP_675566 |
Protein GI | 110635358 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.430063 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACGA ACCGAACAAT CCTTGTCACC GGAGCATCTT CAGGCATCGG CGCCTATTGC GCCCGGGCAC TGAAGCAGGA CGGCTGGCGT GTCTTCGCCA CCGCCCGCAA GCCGGAAGAC ATCTCCGCTT TGGAGAATGA CGGGATCGAA GCCTTCTATC TCGATTATCG CGAGCCGGCC TCAATCGCCG CCCTCGCGGA AAGCGTATTG GCGCGAACCG GAGGCCGGCT CGACGCTCTC TTCAACAACG GCGCCCATGC CCAGGCGGGA GCCGTGGAGG ACCTGCCCGT GGAGGCGCTG CGCGAGCAGT TCGAGGCCAA TTTTTTCGGC TGGCACGATC TGACACGGCG CATTGTGCCG GCCATGCGCG TGCAAGGCAG CGGCCGGATC GTCCATTGCT CCTCGATCCT CGGATTGCTC CCCATTAAAT ATCGCGGCGC CTATGCCGCA TCCAAGCATG CCGTCGAGGG GCTGATGCTT TGCCTGCGCG CTGAACTTCA GGGCTCGGGC ATCCAGGTCT CGCTTATCGA GCCAGGGCCT ATCCGCTCAA ACATCGCCGC AAATGGTCTT GCCTGGTTCG AGCGCTATAT CGACGTGGAG AGCTCAGTCC ACCGCGAAGC TTATCAGGCG CAGCTTGCCA GGCTAAGGGC CGGTGGCAGC AAGTCGCGCT TAAAACTCGG GCCGGAGGCG GTATATAAGG ACCTGCGTCA CGCGCTGCTT CACCCGCGAC CGCGACCGCA TTACGTTATA ACCCTGCCGG CAAAGATCGG CGTCACCATG AAGCGATTCC TTCCCGCGGG GGTCTTCTAC CGGCTGATTG CCGGCCAGGG ATGA
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Protein sequence | MKTNRTILVT GASSGIGAYC ARALKQDGWR VFATARKPED ISALENDGIE AFYLDYREPA SIAALAESVL ARTGGRLDAL FNNGAHAQAG AVEDLPVEAL REQFEANFFG WHDLTRRIVP AMRVQGSGRI VHCSSILGLL PIKYRGAYAA SKHAVEGLML CLRAELQGSG IQVSLIEPGP IRSNIAANGL AWFERYIDVE SSVHREAYQA QLARLRAGGS KSRLKLGPEA VYKDLRHALL HPRPRPHYVI TLPAKIGVTM KRFLPAGVFY RLIAGQG
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