| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2955 |
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| Symbol | |
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| ID | 4181849 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3214921 |
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| End bp | 3216600 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638068839 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_675492 |
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| Protein GI | 110635284 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCCAT CACGGCCAAT GCGCTGTCCA GCGGAGGAAA AAGCAATGAC GCACAGCGAT
GGCGAGCACG TGCATGGAAT CGCGGTAATC GATCCGACGG GAGCGGTGCA GTTTCACGCA
GGCGCCGCCT CAGACATGCG AGTGCGCGCC ATGATCAGCG ACCCCGCCTG GCTCGCTGAA
GCGGCGGAGC GGCGGCTTAG CGCTCTCACT TTAAACGATC AGAGCATGGC GGTGCTGGCC
GTCCCGTTTG TTGGCGGGCA TTTCATCGCA TTGTTCGAGG AACGTGGAGC GACCGCGATC
AAATTTTTGC TGAACGTGGA TTTCGCGTTC GACATTATAG AGCAGTTGCT TAGCGACCCC
TATGATGGAA TGGCCATAAT CAATGCCGAT GAACGGCTCG TCTACGTCTC GCCCGTTCAT
GAGAAATTCT TCGGCCTGGA GCCGGGCGGC GGCATCGGTC GTAAAGTACG CGACGTGATC
GAGAATACGC GGCTGCATAT CGTGGTGCGC ACCGGCATTG CCGAGATCGG TCAGATCCAG
AAGATGAATG GAAGCGAGCG CGTGGTTTCC CGCCTGCCGG TCCGACGAGG GGGAAAGATT
GTCGGCGCGA TAGGCCGCGT GATGTTCAAG GGCCCGCAAC AGGTGGAAGC GCTAGCGCGC
CGGATCAGTG CGCTGGAACA GGAAATCGCC ACGTATAAGT CCGAGCAGCG CAAGCACACA
GAGGCCGAGA AATACCTCTC GTGCATCATC GGGCAGAGCG AGGCTATGGT TCGCCTGCGA
GACCAGATTC GCAAGATTGC GCCGCTGGAC ATCCCCGTTC TGGTGCAAGG CGAGAGCGGA
ACGGGCAAGG AATTGGTTGC CCGAGCGCTC CACATGATGA GCCCACGTCG CGATGCTCGG
CTCGTCAATG TCAACGCTGC CGCGCTGCCG GCGCAACTGG TTGAGAGCGA GCTTTTTGGC
TACGAGGGAG GCGCGTTCAC AGGCGCCGAC AGGAAAGGCC GTGCAGGTAA GTTCGAACTG
GCCGACAAGG GTACGATCTT TCTCGATGAA ATCGGCGATA TGCCGCTTGA AACGCAATCT
AAGCTGCTGC GCATTCTGCA AGACCGTGTT GTCGAGCGGG TCGGCGGCGC CACCCCCAAG
AAGATAGATT TTCGCTTATG TTCGGCGACA AACCGCGACC TTGCGGATTT TGTCGAAACG
GGCCGTTTCC GGCTCGATTT GTTCTACCGG ATAAGCCCCA TAATTATCCA GATTCCGCCA
CTGGCGGATA GGCTGGAAGA CATCCCCCTG CTGCTCGCAC ATTTTTTGAA GGAACTGTCG
GCGCAGCATG GCCGGGATGT TCCCGAGGTA GACAGCAATG TCTCCGATTA TCTCATGGAA
CGAAGCTGGC CGGGCAATGT GCGTGAACTC TTTCATAACA TCGAGCGCGC GCTTGTGTTC
TGCGACAATG GAAAATTGCG AATAGAGAAT TTCCAGGAGG CTGAGCGGAT GGGGCGCGCT
GCGCCGCGCG AGGCGAGCGT CGTTAGAACG GACACACCTG GCTCCCTGCG TGACACGCTG
GATCGCGTCG AACAGGAACT TGTCGTGGCG GCGCTCGACC GGTTCCACGG CAACAAGAAG
AAGGCCGCCG AGTATCTGGG GATCTCGCGC AGCTATCTCT ACAAGAAGCT TTCGGGCTGA
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| Protein sequence | MAPSRPMRCP AEEKAMTHSD GEHVHGIAVI DPTGAVQFHA GAASDMRVRA MISDPAWLAE
AAERRLSALT LNDQSMAVLA VPFVGGHFIA LFEERGATAI KFLLNVDFAF DIIEQLLSDP
YDGMAIINAD ERLVYVSPVH EKFFGLEPGG GIGRKVRDVI ENTRLHIVVR TGIAEIGQIQ
KMNGSERVVS RLPVRRGGKI VGAIGRVMFK GPQQVEALAR RISALEQEIA TYKSEQRKHT
EAEKYLSCII GQSEAMVRLR DQIRKIAPLD IPVLVQGESG TGKELVARAL HMMSPRRDAR
LVNVNAAALP AQLVESELFG YEGGAFTGAD RKGRAGKFEL ADKGTIFLDE IGDMPLETQS
KLLRILQDRV VERVGGATPK KIDFRLCSAT NRDLADFVET GRFRLDLFYR ISPIIIQIPP
LADRLEDIPL LLAHFLKELS AQHGRDVPEV DSNVSDYLME RSWPGNVREL FHNIERALVF
CDNGKLRIEN FQEAERMGRA APREASVVRT DTPGSLRDTL DRVEQELVVA ALDRFHGNKK
KAAEYLGISR SYLYKKLSG
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