Gene Meso_2874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2874 
Symbol 
ID4182686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3126350 
End bp3127897 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content62% 
IMG OID638068762 
Productlipopolysaccharide biosynthesis 
Protein accessionYP_675415 
Protein GI110635207 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATGAAG TAGCAAAACC CCCTCGCGGA TCGAAGAAGC CCGGTGGTGC TCCGGCCGCG 
AAGCCGGCCG CCCGCGGCTC GCTTCTCAAC ATGCTCCCCA GCGCCGCGCC TGCCATAGAG
CCAGCTGAGC CGCCAGTCAC CCCGCGGCTT CCTGCCAACG AAGCGCGCAT TTCCGACTAT
CTGGAACGCT TTCGCCGCCT CACGCCGGAC GATGTGCTCT CATGGCTCGA CCGAGGGAAA
TACCTCATTG CCCTGATGGT GCTGCTCGGA GTGGGCCTCG CCCTTGGCTA TGCTATCACT
GCCACGCCGC GATACACCGT CTACACCGAT ATCGTGGTCG ACCCGTCCAA CCTGCAGGTG
GTCGATGACG ATGTTTTCGC CAACACGCCG CAGCGCGACA CCCAGCTGCT TGAGGTGGAA
AGCAAGCTGA GGGTCCTTAC CTCGCGCAAC GTGCTGGAGC GCGTCATCGA CGAGCTGAAC
CTGACGGAAG ACCCCGAATT TGTGAAACCG GGCTGGTTTG ATCCGATCAA AGAGCTCATC
TCCGGTCCTC CCGAGGAAGA AGATCTGAAG CTTAGCGTTT TGCGAGCCCT TTCCGAACGT
GTTGAAGCGC GCCGCGAAGA GCGTTCCTAT GTCGTGGTGC TCAGCGTCTG GACGGATGAC
GCCCTCAAGT CGGTCGAAAT CTCCAATGCC ATCGTGGATG CTTTCGAGAC GGAGCTGTTC
GAATCCGCCT CACGGAGCGC TGGCCGCGTT GCCTCCAGCA TCAGCCAGCG CCTGGACGAG
TTGCGGGCCA GTGTCACGGA AGCGGAGGCG CGCGCGGAAG AATTCAAGCG CGAGAACGAT
CTCCAATCGA GCGGTGACGA CCTGGTGAGC GCACGCCGTT CCGGCGAGCT GGACACCCAG
GTTTTGGCAG CCCAACAGCG CCAGATCCAG CTCGACACAC GTTATCGCGA ACTCCAGCGG
GCTCTGGACG AACGAAGCTC CGCCACCCTG CCCGGCTTCC AATCGGAAAC CCTGACGACG
CTGCGGGCCC AGTACAACGA TCTTCAGCAG CAGTTGCAGG CTCTTTCACT CACCTATCTG
GACCGGCATC CGCGCCTGCA AGCGATCAGA ACCGAAATAG CCTCTGTGGA ACGTGCCATT
GCCGCGGAAG CCCAACGCAT CCTCAATGCT GCCAAATCGG AAGCCGACCA GGCGAACATG
GTCCTGACTG AACTGCGCCA GAAAGCGCAG GAAGAAGAAA ACACCGTTTT CCAGGACAAC
AGCGCTCTGG TGACGCTTCG TGAACTGGAA CGTGATGCAC GCGCGAAGGC CGCGCTTTAC
GAGACATTCC TTTCGCGCAG CCAGCAGATC ACCGAAAGAC AGCAGATCGA CACCAGCAAT
ATCCGCGTGA TCTCGCGCGC CGTGCCACCG ACCTCGCGAA GCTGGCCGCC GCGCACCATG
ATCCTCCTCG CTGCGGGCGC CCTGGCTGGA CTCTTCATCG GCCTAGGCTT GGCGCTGGCG
CTCGGGCTTC TAAGACATCT GCGCCAGCCG CACCGGTACG CCACATGA
 
Protein sequence
MYEVAKPPRG SKKPGGAPAA KPAARGSLLN MLPSAAPAIE PAEPPVTPRL PANEARISDY 
LERFRRLTPD DVLSWLDRGK YLIALMVLLG VGLALGYAIT ATPRYTVYTD IVVDPSNLQV
VDDDVFANTP QRDTQLLEVE SKLRVLTSRN VLERVIDELN LTEDPEFVKP GWFDPIKELI
SGPPEEEDLK LSVLRALSER VEARREERSY VVVLSVWTDD ALKSVEISNA IVDAFETELF
ESASRSAGRV ASSISQRLDE LRASVTEAEA RAEEFKREND LQSSGDDLVS ARRSGELDTQ
VLAAQQRQIQ LDTRYRELQR ALDERSSATL PGFQSETLTT LRAQYNDLQQ QLQALSLTYL
DRHPRLQAIR TEIASVERAI AAEAQRILNA AKSEADQANM VLTELRQKAQ EEENTVFQDN
SALVTLRELE RDARAKAALY ETFLSRSQQI TERQQIDTSN IRVISRAVPP TSRSWPPRTM
ILLAAGALAG LFIGLGLALA LGLLRHLRQP HRYAT