Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2874 |
Symbol | |
ID | 4182686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3126350 |
End bp | 3127897 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638068762 |
Product | lipopolysaccharide biosynthesis |
Protein accession | YP_675415 |
Protein GI | 110635207 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGAAG TAGCAAAACC CCCTCGCGGA TCGAAGAAGC CCGGTGGTGC TCCGGCCGCG AAGCCGGCCG CCCGCGGCTC GCTTCTCAAC ATGCTCCCCA GCGCCGCGCC TGCCATAGAG CCAGCTGAGC CGCCAGTCAC CCCGCGGCTT CCTGCCAACG AAGCGCGCAT TTCCGACTAT CTGGAACGCT TTCGCCGCCT CACGCCGGAC GATGTGCTCT CATGGCTCGA CCGAGGGAAA TACCTCATTG CCCTGATGGT GCTGCTCGGA GTGGGCCTCG CCCTTGGCTA TGCTATCACT GCCACGCCGC GATACACCGT CTACACCGAT ATCGTGGTCG ACCCGTCCAA CCTGCAGGTG GTCGATGACG ATGTTTTCGC CAACACGCCG CAGCGCGACA CCCAGCTGCT TGAGGTGGAA AGCAAGCTGA GGGTCCTTAC CTCGCGCAAC GTGCTGGAGC GCGTCATCGA CGAGCTGAAC CTGACGGAAG ACCCCGAATT TGTGAAACCG GGCTGGTTTG ATCCGATCAA AGAGCTCATC TCCGGTCCTC CCGAGGAAGA AGATCTGAAG CTTAGCGTTT TGCGAGCCCT TTCCGAACGT GTTGAAGCGC GCCGCGAAGA GCGTTCCTAT GTCGTGGTGC TCAGCGTCTG GACGGATGAC GCCCTCAAGT CGGTCGAAAT CTCCAATGCC ATCGTGGATG CTTTCGAGAC GGAGCTGTTC GAATCCGCCT CACGGAGCGC TGGCCGCGTT GCCTCCAGCA TCAGCCAGCG CCTGGACGAG TTGCGGGCCA GTGTCACGGA AGCGGAGGCG CGCGCGGAAG AATTCAAGCG CGAGAACGAT CTCCAATCGA GCGGTGACGA CCTGGTGAGC GCACGCCGTT CCGGCGAGCT GGACACCCAG GTTTTGGCAG CCCAACAGCG CCAGATCCAG CTCGACACAC GTTATCGCGA ACTCCAGCGG GCTCTGGACG AACGAAGCTC CGCCACCCTG CCCGGCTTCC AATCGGAAAC CCTGACGACG CTGCGGGCCC AGTACAACGA TCTTCAGCAG CAGTTGCAGG CTCTTTCACT CACCTATCTG GACCGGCATC CGCGCCTGCA AGCGATCAGA ACCGAAATAG CCTCTGTGGA ACGTGCCATT GCCGCGGAAG CCCAACGCAT CCTCAATGCT GCCAAATCGG AAGCCGACCA GGCGAACATG GTCCTGACTG AACTGCGCCA GAAAGCGCAG GAAGAAGAAA ACACCGTTTT CCAGGACAAC AGCGCTCTGG TGACGCTTCG TGAACTGGAA CGTGATGCAC GCGCGAAGGC CGCGCTTTAC GAGACATTCC TTTCGCGCAG CCAGCAGATC ACCGAAAGAC AGCAGATCGA CACCAGCAAT ATCCGCGTGA TCTCGCGCGC CGTGCCACCG ACCTCGCGAA GCTGGCCGCC GCGCACCATG ATCCTCCTCG CTGCGGGCGC CCTGGCTGGA CTCTTCATCG GCCTAGGCTT GGCGCTGGCG CTCGGGCTTC TAAGACATCT GCGCCAGCCG CACCGGTACG CCACATGA
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Protein sequence | MYEVAKPPRG SKKPGGAPAA KPAARGSLLN MLPSAAPAIE PAEPPVTPRL PANEARISDY LERFRRLTPD DVLSWLDRGK YLIALMVLLG VGLALGYAIT ATPRYTVYTD IVVDPSNLQV VDDDVFANTP QRDTQLLEVE SKLRVLTSRN VLERVIDELN LTEDPEFVKP GWFDPIKELI SGPPEEEDLK LSVLRALSER VEARREERSY VVVLSVWTDD ALKSVEISNA IVDAFETELF ESASRSAGRV ASSISQRLDE LRASVTEAEA RAEEFKREND LQSSGDDLVS ARRSGELDTQ VLAAQQRQIQ LDTRYRELQR ALDERSSATL PGFQSETLTT LRAQYNDLQQ QLQALSLTYL DRHPRLQAIR TEIASVERAI AAEAQRILNA AKSEADQANM VLTELRQKAQ EEENTVFQDN SALVTLRELE RDARAKAALY ETFLSRSQQI TERQQIDTSN IRVISRAVPP TSRSWPPRTM ILLAAGALAG LFIGLGLALA LGLLRHLRQP HRYAT
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