Gene Meso_2708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2708 
Symbol 
ID4181734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2945792 
End bp2946631 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content60% 
IMG OID638068596 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_675250 
Protein GI110635042 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0395] ABC-type sugar transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.169914 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCG CCCGCTCCTC CCCTTGGCGC AGCGTTGCGG CACATGCCGC GCTCATCACC 
TATACGGCGA TCGCGCTGTT CCCGGTTATC GTCATCGTCA TCAATTCGTT CAAGACGCGC
CAGGCGATCT TCCGCTCTCC CCTTTCCCTA CCCGACGCCG AAACATTCAG CCTCGTCGGC
TATCAGACGG TGATGACGCA GGGCGACTTC TTCCTCTATT TCCAGAACAG CCTCATCGTA
ACAGTCGCAT CGCTGTTTTT CGTGCTCCTT TTCGGGGCCA TGGCGGCCTT CGCGCTTGCC
GAATACCGCT TTCGCGGCAA CCCGCTCATG GGCCTTTATC TCGCCCTCGG CATCATGATC
CCCATTCGGC TCGGCACGGT GGCGATCCTT CAACTCATGG TGGCGAGCGG CCTCGTCAAC
ACGCTTACGG CCCTGATTCT GGTCTATACG GCGCAAGGGC TGCCGCTCGC CGTCTTCATT
CTCTCGGAGT TCATGAAACA GGTTTCCGAA GACTTGAAGA ATGCCGGCCG CATCGACGGG
CTTTCGGAAT ACCGCATCTT CTTCCGCCTC GTCCTGCCGC TCGTGCGTCC GGCCATGGCC
ACCGTCGGGG TATTCACCAT GATCCCGATC TGGAACGACC TGTGGTTTCC GCTGATCCTT
GCGCCGGCTG AAGCCACGAA GACCATCACC CTCGGTGCCC AGATCTTCCT CGGCCAATTC
GTGACCAACT GGAACGCAGT TCTGTCCGCC CTTTCGCTGG CGATCCTCCC CGTCCTCATC
CTCTATCTCA TCTTCTCCCG CCAGCTCATT CGCGGGATCA CTGCAGGAGC CGTCAAATGA
 
Protein sequence
MSRARSSPWR SVAAHAALIT YTAIALFPVI VIVINSFKTR QAIFRSPLSL PDAETFSLVG 
YQTVMTQGDF FLYFQNSLIV TVASLFFVLL FGAMAAFALA EYRFRGNPLM GLYLALGIMI
PIRLGTVAIL QLMVASGLVN TLTALILVYT AQGLPLAVFI LSEFMKQVSE DLKNAGRIDG
LSEYRIFFRL VLPLVRPAMA TVGVFTMIPI WNDLWFPLIL APAEATKTIT LGAQIFLGQF
VTNWNAVLSA LSLAILPVLI LYLIFSRQLI RGITAGAVK