Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2529 |
Symbol | |
ID | 4179288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 2707935 |
End bp | 2709134 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638068418 |
Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
Protein accession | YP_675078 |
Protein GI | 110634870 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.392688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACCGAGA GACTACGCGT AGAGAACGTG TATAAGGTCT TCTCCAACAC CCCGCAGAAG GCGATGGAAA GGCTCGCTGC CGGCGCCGAC AAGGACGCGG TGCAAGCTGA ACTCGGCGTG GTTGTCGGCC TCAATGACGT ATCGCTCTCC GTGCCGACCG GCGCCATTTA TATGATCATG GGGCTTTCGG GCTCCGGCAA GTCCACGTTG GCGCGCTGCG TCAACCGCCT TTACGAGCCG ACTGCCGGGC GAATCCTGCT CGATGGCGAG GACATCGTCC AACTCAACCA GAACGAACTG CGTCAGGTCC GCCGGACCCG CATCTCAATG GTCTTCCAGC ATTTTGCACT GCTGCCCAAC CGCACGGCGA TCGAGAACGT CGAGTTCGGC CTGAAGCTGC GAGGGCTCGT CCCAAAAAAG CGGCGGGCGC GCGCCGAGGA GGTTCTGGCA ATCGTCGGGC TGGACCGCTG GGCCTATCAT TTCCCGCACG AGTTGTCGGG CGGTATGCGC CAGCGGGTTG GGCTAGCACG CGCACTTGCG ACCGACGCGG ATGTGCTGGT AATGGACGAG GCGTTCAGCG CACTCGATCC GCTGATCCGC AACGAAATGC AGGACGAGCT GCTGCGCCTC CAGCATTCGC TCAAGAAAAC CATCCTGTTC ATCACTCATG ATTTCCAGGA GGCACTGAAG CTCGGCAACA TGATCGCCAT CATGGCCGAT GGCCGTGTGA TGCGCGAGGG CACACCGCAA TCGATCGTGC TGGACCCCGG CACCGACTAT GTCGCAGCCT TTACCAACGA TGTCGACCGA TCCCGCCTGT TCGATGCAGC CTCGGTGATG CGGCCAGGTA GTGCTGTCGC CGAGCGCGAT GGAATCCGGG TGATTGCGGC GTCTTCGACC GGCGGGTTCG CGGTGGACAC AAAAGCACGC ATCCTCGGTC GTCTCGACGA GGCGGGGCTC GCCAAGGCGA AGGATGGGGC CGACATCCGT GCGGTGCTCG CTCCGGATTT CGTATCGGTC GCGCCGGACA GCAAGCTGCT GGATGTCGCT CGGAAATGCC GCGGCATTGA AGATCTGGCA GTGACCGACA GCGAGGGAAC CTTTCTGGGG GTGCTTTCGC CCGCCAGCAT CCTTACCGCC ATTGCCGCGT CATCTAATGC CGGCCAAGAA CGCCACCTTG AGGAAAAGCG CCATGCTTAA
|
Protein sequence | MTERLRVENV YKVFSNTPQK AMERLAAGAD KDAVQAELGV VVGLNDVSLS VPTGAIYMIM GLSGSGKSTL ARCVNRLYEP TAGRILLDGE DIVQLNQNEL RQVRRTRISM VFQHFALLPN RTAIENVEFG LKLRGLVPKK RRARAEEVLA IVGLDRWAYH FPHELSGGMR QRVGLARALA TDADVLVMDE AFSALDPLIR NEMQDELLRL QHSLKKTILF ITHDFQEALK LGNMIAIMAD GRVMREGTPQ SIVLDPGTDY VAAFTNDVDR SRLFDAASVM RPGSAVAERD GIRVIAASST GGFAVDTKAR ILGRLDEAGL AKAKDGADIR AVLAPDFVSV APDSKLLDVA RKCRGIEDLA VTDSEGTFLG VLSPASILTA IAASSNAGQE RHLEEKRHA
|
| |