Gene Meso_2226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2226 
Symbol 
ID4181539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2374306 
End bp2375802 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content67% 
IMG OID638068122 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_674782 
Protein GI110634574 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGCCTG ATGTCGGAGC GATTCCGCTG ATCGCGCTCG ATGCGGTGGC TTTCGACACG 
GAGACCACCG GCCTCGATAC GCGCACGGCA CGCGTCGTCC AGGTCGCAGG TGTGGCGATC
TCGCGCGGCG CGGTGCGTCA GGACGAGTCC TTCGAAAGCC TTGTCCATCC AGGTATGTCC
ATCCCGCCCG ACTCGATACG CATCCATGGC ATCACCGATG GGATGCTGCG TGAGGCGCCA
GCCTTCGCTG CCGTCTGGCG CAGCTTCGAG ATGTTCCGCG GGGTGCGGCC TCTGATCGGC
TATGCTGTCG GCTTCGATCT GGCGATCATC GAGAGGGAAG CGGCGCGGGC CGGGATCCGG
AGGAAGCGGC CGCGGACCTT GTGCGTGCGA ACGCTGAGCC GCATCGTCAA CCGCGATCTG
CGCGGCCACT CGCTCGAGGC GCTCGCCGCC TGGCTGGGGT TCGAGATCAT CGGTCGCCAT
CAGGCGCTCG ACGACGCGAT GGCCGCAGCG AAAGTGTTCA CGGGACTCCT GCCGAGGCTG
CAGGCCATGG GCATTCGCAC CTTTGCCGAG GCGGAGCGGG CCTCCCTCCA GCTTGCACGG
GAGCAGGACG AGCAGGCAAA GGCCGGATGG GCGGATCCCT TCCTGCGGCC GGTCCCGCAA
CCCTTTGCCG CGATCGACCC CTTTGCCTAC CAGCATCGCG TCGGCGATCT CATGGCTACG
CCTCCTATCT TCGTCCGCCA TGAAACATCG CTCCGCTCGG TGATCGGGCT AATGGCAGAG
AGGCGGGTGG GCTCCGTCCT GGTCTCCGGC GCGGGGGAGG TGGGACATCC CACAGGCGCA
TACGGCATCC TCACGGAGCG CGACGTGCTT CGCTTGCTGG CGGCCGACGG CGGGAATGTT
TTCGAGCGAC TCACCGGCGA GCTCGCAAGC AGGCCGCTCA TCAGCATCCG CGCCCAGGCC
TTCGCCTATC GCGCGATCGG CCGGATGAAC AGGCTCGGGA TTCGCCATCT CGGTGTGCAT
GACGATGATG GTGGTCTCGT CGGCGTGATA TCCGCGCGCG ATCTCCTGCG CCTGCGGGCA
AGCGCGGCGA TCCAGCTCGA CGACGCGATC GACGCCGCAA GGTCCGATGC CGACATGGCC
GCCGCCTGGG CCTCTCTTCC CTCCGTTGCG TCGGTACTGG TGGCAGAGAA GATCGAAGCG
CGGACCGTTG CCGAGATCGT CAGCGAGGAA CTGCGCGCCA TCACGCGTCG GGCGGCGATC
CTTGCGGAAG AGGAAATGAA GATTGTCGGT CTGGGCGACC CACCCTCACG CTATGCCGTA
CTTGTTCTTG GTTCCGCCGG GCGGGCGAGA GCCTGCTTGC CGCCGACCAG GACAATGCCA
TCGTTTTCGA GCGGGGCGCG CCGGGCGGGC CGGAGGATCG GTGGTTCGGC GCCCTTGGTG
GGCGGATCGC TGCCATTCTC GATACGGCCG GGATCGCCTA TTGCAAGGGC GGCGTGA
 
Protein sequence
MQPDVGAIPL IALDAVAFDT ETTGLDTRTA RVVQVAGVAI SRGAVRQDES FESLVHPGMS 
IPPDSIRIHG ITDGMLREAP AFAAVWRSFE MFRGVRPLIG YAVGFDLAII EREAARAGIR
RKRPRTLCVR TLSRIVNRDL RGHSLEALAA WLGFEIIGRH QALDDAMAAA KVFTGLLPRL
QAMGIRTFAE AERASLQLAR EQDEQAKAGW ADPFLRPVPQ PFAAIDPFAY QHRVGDLMAT
PPIFVRHETS LRSVIGLMAE RRVGSVLVSG AGEVGHPTGA YGILTERDVL RLLAADGGNV
FERLTGELAS RPLISIRAQA FAYRAIGRMN RLGIRHLGVH DDDGGLVGVI SARDLLRLRA
SAAIQLDDAI DAARSDADMA AAWASLPSVA SVLVAEKIEA RTVAEIVSEE LRAITRRAAI
LAEEEMKIVG LGDPPSRYAV LVLGSAGRAR ACLPPTRTMP SFSSGARRAG RRIGGSAPLV
GGSLPFSIRP GSPIARAA