| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2217 |
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| Symbol | mnmA |
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| ID | 4181911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 2364456 |
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| End bp | 2365631 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638068113 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_674774 |
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| Protein GI | 110634566 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.560846 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGCC TTGACCTTCC GGGACGCCCT GAAGCGACGC GCGTCGTCGT TGCCATGTCG
GGCGGCGTGG ATTCATCCGT CGTCGCGGGC CTTTTGGCTC GGGAGGGTTA TGAGGTCGTA
GGCGTCACCC TGCAGCTATA CGATCATGGT GCCGCCGTGC ACCGCGCGGG TTCCTGCTGC
GCGGGCCAGG ATATCGATGA TGCCCGGCGC GTCGCCGAGA CCCTGGGCAT CGCCCATTAT
GTGCTCGATT ATGAAGAGCG CTTCCGCAAG GCCGTCATCG ATCCTTTCGC CGAAAGCTAT
GTGACGGGCG AGACGCCTAT CCCTTGCGTC GCCTGCAATC AGACCGTCAA GTTCTCAGAT
CTTTTGGAGA CGGCGCGCGA GCTCGGCGCG GATGCGCTCG CCACCGGCCA TTACATCCGC
TCCCGCGCCA ATGGAGCGCA TCGGGCGCTT TACCGCCCAG TGGACGCCGA CCGGGACCAG
AGCTATTTCC TGTTCGCCAC CACCCAGGAG CAGATCGACT ATCTTCGCTT TCCCCTCGGC
GGCATGTCGA AGCCGCAGGT CCGGGCGATC GCGGAAGAAA TGGGACTGTC CGTTGCCGCC
AAGCATGACA GCCAGGATAT CTGCTTTGTG CCGCGCGGCA AATATTCCGA CGTGATCACC
AAGCTCAAGC CGGGCGCGGC AAGCCCCGGT GATATCGTGC ATATCGACGG GCGCGTGCTC
GGCCGCCATG AGGGCATCCT GCACTATACG ATCGGCCAGC GCCGCGGCAT TGGGATCGCC
GCCGGCGAGC CGCTTTATGT GGTGCATCTT GATGCAGAGC ACGCGCGAGT CGTGGTTGGC
CCGCGTGAGG CGCTGGAGAC GCGCAGGCTG ATCCTGCGCC AGGTAAACTG GCTGGGCGAT
TTTCCGCTCG AGGAACTGCC GGCGAACGGA ATGGACCTGT TCGCAAAGGT GCGCTCAACG
CGCCCGCCGA CGCCTGCGAC GCTGCACAAT CGGGACGGCT CGACCTGGGT GGAATTGCAT
GAGGGTGAAA CAGGCGTCGC CCCTGGTCAG GCCTGTGTGC TCTATTCGGA TGACCGGAAC
GACGCACGCG TCTTTGGCGG CGGCTTTATC GAGCGCTCCG AACGGTGCGC CGACGCCGAA
GCCCTGCTCT CCCGCCTGGA GAAGATCCCG GCCTGA
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| Protein sequence | MNSLDLPGRP EATRVVVAMS GGVDSSVVAG LLAREGYEVV GVTLQLYDHG AAVHRAGSCC
AGQDIDDARR VAETLGIAHY VLDYEERFRK AVIDPFAESY VTGETPIPCV ACNQTVKFSD
LLETARELGA DALATGHYIR SRANGAHRAL YRPVDADRDQ SYFLFATTQE QIDYLRFPLG
GMSKPQVRAI AEEMGLSVAA KHDSQDICFV PRGKYSDVIT KLKPGAASPG DIVHIDGRVL
GRHEGILHYT IGQRRGIGIA AGEPLYVVHL DAEHARVVVG PREALETRRL ILRQVNWLGD
FPLEELPANG MDLFAKVRST RPPTPATLHN RDGSTWVELH EGETGVAPGQ ACVLYSDDRN
DARVFGGGFI ERSERCADAE ALLSRLEKIP A
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