Gene Meso_1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1953 
Symbol 
ID4182520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand+ 
Start bp2094280 
End bp2095290 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content66% 
IMG OID638067849 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_674511 
Protein GI110634303 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.112337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGCCG CCGCCAAAAT CATGCAGCAG CCCGGCGAGG CACTGATTGA AATCCACGAC 
CTGACGGTGC AGTTCCGCAC CGCCGGCCGC GCCATCAACG CCGTCCGCGG CATCGACCTC 
AGCATCGGGC CGGGCGAAAG CGTCGCCATC CTCGGCGAAT CCGGCTCGGG CAAGAGCGTC 
ACAGGCAAGG CCGTAATGGG GCTGATCAAC GCGCCCGGCA AGGTGAGCGG CTCGGTGCGC 
TTCGCCGGGC GAGAACTGGT TGGCCTGAGC GAAACCGAGT TGCAGGACGT GCGCGGTCCC 
GGGTTGGCGA TGGTGTTCCA GGATTCTCTT GATGCGCTCA ACCCGGTATT CTCGGTGGGC 
GAGCAGATCA TGGAAATCCT GATGGTCCGG CTCGGCTGGT CGCGGGAGAA ATCGCGGGCC 
GAGGCCATTT CGCTGATGCA GCAGGTGGGC ATCGACAGCG CCGAAAAGCG GCTCAGCAGC 
TATCCGCATC AGTTCTCCGG CGGCATGCGT CAGCGCATCT GCATTGCCAT GGCCATCGCA 
CTCAAGCCGC AACTGCTGAT CGCCGACGAG CCGACCACCG CCCTCGATGT CACCGTGCAG 
GCCGGCATCC TCAAGCTGAT TGCCAAGCTG CAGCGCGAGA GCGGCATGGC GCTGCTGTTC 
GTCACCCATG ACCTGGCGGT GGCGCGGCAG GTGGCAAGCT ATCTGGTGGT GATGTATGCC 
GGGCGCATCG TCGAGCGCGG CCCGATTGAC GCGCTCTATG CCCGGCCGGC CCATCCCTAT 
ACCCGGGCGC TGCTCAACTC CAATCCGGGC AGCGTGAGCC ACTGGTCACA GTTACACCCC 
ATCTCTGGTA ATCCGCCCGA CAAGACCATG GTTTTCACCG GCTGCGCCTT TGCCGACCGC 
TGCCCGCGCG CCGTGTCGCG CTGCCGCGCC GAAGCGCCGG CGCTGCGCCA GGTTGCCCCC 
GGCCGCGACA GCCGCTGCCA TTTCGCCGAG GAGTTGCTCG ATGCGCACTG A
 
Protein sequence
MTAAAKIMQQ PGEALIEIHD LTVQFRTAGR AINAVRGIDL SIGPGESVAI LGESGSGKSV 
TGKAVMGLIN APGKVSGSVR FAGRELVGLS ETELQDVRGP GLAMVFQDSL DALNPVFSVG 
EQIMEILMVR LGWSREKSRA EAISLMQQVG IDSAEKRLSS YPHQFSGGMR QRICIAMAIA 
LKPQLLIADE PTTALDVTVQ AGILKLIAKL QRESGMALLF VTHDLAVARQ VASYLVVMYA 
GRIVERGPID ALYARPAHPY TRALLNSNPG SVSHWSQLHP ISGNPPDKTM VFTGCAFADR 
CPRAVSRCRA EAPALRQVAP GRDSRCHFAE ELLDAH