Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1935 |
Symbol | |
ID | 4181943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 2072112 |
End bp | 2073185 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638067831 |
Product | spermidine/putrescine ABC transporter ATPase subunit |
Protein accession | YP_674493 |
Protein GI | 110634285 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.786432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTAA AGCTAAAGAT CGAGGGAGTG AGAAAATCCT ACGGGTCTGT CAGGGCCCTG AACCCCATCT CAGTGGATGT GCCGGCGGGA GAATTTCTGA CGCTGCTCGG TCCGTCTGGG TCGGGTAAGA CTACTTTGTT GCAGATCTTG TCCGGGCTCG TAGTACCGGA TGATGGCGCC ATTTGGATTG ACGAGAAGCT CGCGACCCAT CTGCCGCCCT CTCAGCGCGA TATCGGCATG GTATTCCAAA ACTATGCCCT GTTCCCTCAT ATGACGGTCG CTGAAAACAT TGCCTTTCCG CTCCAGATGC GCGGCATGAA GAGCGCTGAC ATCGCGCCGA AGGTGCGTAG AATTCTAGAA ATCGTTCAAC TGCCGCACAT GGCCGATCGG TTTCCGAGAG AGCTTTCTGG CGGGCAACAA CAGCGTGTAG CGTTGGCTCG CTGCGCTGTC TACGAACCGC CAATCATACT CATGGACGAG CCCCTGGGCG CTCTCGATAA GAATCTGAGA GACCAAATGC AACTAGAAAT AATCCACCTG CACAAGGCGC TGTCGACCAC CATTCTCTAC GTCACCCATG ACCAGGAGGA GGCGATGGCC ATGTCCGACC GCATTTGCCT GATGAAGGAT GGGCAAATCG AACAGATCGG CACGCCACGT GATCTCTACC GTGCCCCGCG AACGGAATTC GTCGCCAATT TCTTCGGTCG ATCGAACGTC TTCAAGTGCA CCGTTAAGAA CCGGTTTGAA AACACAGTGC TGCTGGATGC GCCCATCGGA CCGATGATTG CTACGAACAG CTCAAGGGAA GAGGAGGCCA GGAAGGGGCA AGACGTATCT GTCGTCGTCA GGCCGGAAGA TGTCCGCTTC CTGAAAGACA ACGAAAGCGC TGACAATGAG ATCGTTGTCA ATCTCAGGCA GAGGGTGATG ACAGGGGCGA CTACACGATA TCTGGCGGAA AGCAAGGACA ATACACCGAT AGAGATATTG TCTTTCAGCT CGACAGGGAC CTTAACCGTC GGTGACGAGT GCCGGGTAGG ATGGTCCAAG GAGAACGTTA CCATCGTCCG CTGA
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Protein sequence | MDLKLKIEGV RKSYGSVRAL NPISVDVPAG EFLTLLGPSG SGKTTLLQIL SGLVVPDDGA IWIDEKLATH LPPSQRDIGM VFQNYALFPH MTVAENIAFP LQMRGMKSAD IAPKVRRILE IVQLPHMADR FPRELSGGQQ QRVALARCAV YEPPIILMDE PLGALDKNLR DQMQLEIIHL HKALSTTILY VTHDQEEAMA MSDRICLMKD GQIEQIGTPR DLYRAPRTEF VANFFGRSNV FKCTVKNRFE NTVLLDAPIG PMIATNSSRE EEARKGQDVS VVVRPEDVRF LKDNESADNE IVVNLRQRVM TGATTRYLAE SKDNTPIEIL SFSSTGTLTV GDECRVGWSK ENVTIVR
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