Gene Meso_1859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1859 
Symbol 
ID4182044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand+ 
Start bp1997901 
End bp1998887 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content67% 
IMG OID638067752 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_674417 
Protein GI110634209 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase
[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGC CGCTGCTCCA GATACGCGAG GCCGCGAAGA CCTTTCACGT CGGCAGCTCC 
GAGGTGAAGG CTCTAAAGGG CGTCAATCTA TCGGTCGGCA AGGGAGAGAC CGTCGCCATT 
GTCGGCGAAT CCGGATCGGG CAAGACGACG CTCGCCAACC TCATTCTGGG CATCGAGAAG 
CCATCCGCCG GCGAGATCGT CCTGGCGGGC AGGCCATTGT CCGGCCGGCG CTCGAAGGCG 
GACCGCCGGC AGATCGGCCT CGTGCAGCAG AATCCCTACT CCACGCTCAA CCCGCGCAAA 
TCCATCGGCC AAGCGATCGG GTTGCCGCTC TCGGTCCACA ATGTCTGCCG CCGATCCGAA 
CGGCGCCGGC GGATCGGCGA GCTTCTGGAA AAGGTAGGCC TTCATCCCGA GCTGCAGGAC 
CGGCGGCCGC TAGCTCTTTC GGGCGGGCAA CGGCAGCGCG TGGCCATTGC CCGCGCGCTC 
GCAACGGACC CGGAGCTGCT GGTGCTCGAC GAGCCCACCT CCTCGCTCGA CGTCTCCGTG 
CAGGCACATA TCCTGCGGCT TCTAAAGGAC CTGCAGGAGG AGCTGGGCCT GACCTATCTC 
TTCATCACCC ATGATCTGAG CGTCGTGCGC GTGCTCGCCA GCCGCGTGAT CGTGATGTAT 
CGCGGCCTGG TGGTCGAGGA AGGCGCCGTC GCGGACGTGT TTTCCGGGCC GCGCCACCGC 
TATACGCAGC AGCTCCTGGC CTCTATCCCA ACCGTTTCGG CGGAGGACGA CCGCCTGAAG 
CCCGACTGGT CGTGGGAGGC CGACGTGGAC AGCACCGAGG TCGCGGAGGA AGGCTGCCCG 
TTCCGCCCGC GCTGCCCGTT CGCGCTTCCC GCTTGCGCCG CCGGGACTCC GGTCCTGGCG 
GGGCCCAAGC ATCACCTCCA TGCCTGCCTC AATCCCGGCG GCGCCCCAAC ACGCAAATCA 
AGCCTGGAGC TATTGGCCGG CCAATGA
 
Protein sequence
MSEPLLQIRE AAKTFHVGSS EVKALKGVNL SVGKGETVAI VGESGSGKTT LANLILGIEK 
PSAGEIVLAG RPLSGRRSKA DRRQIGLVQQ NPYSTLNPRK SIGQAIGLPL SVHNVCRRSE 
RRRRIGELLE KVGLHPELQD RRPLALSGGQ RQRVAIARAL ATDPELLVLD EPTSSLDVSV 
QAHILRLLKD LQEELGLTYL FITHDLSVVR VLASRVIVMY RGLVVEEGAV ADVFSGPRHR 
YTQQLLASIP TVSAEDDRLK PDWSWEADVD STEVAEEGCP FRPRCPFALP ACAAGTPVLA 
GPKHHLHACL NPGGAPTRKS SLELLAGQ