| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1833 |
|---|
| Symbol | |
|---|
| ID | 4182134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1968708 |
|---|
| End bp | 1969607 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638067726 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_674391 |
|---|
| Protein GI | 110634183 |
|---|
| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGATA GAGCAGTGGA AATAGGACAG GCGCCTGCGC AGGAGCAGGT CTACCGTCCC
TGGCGTGCCA TTGCGCGCAA GTTCTTTAGC TACAAGGCAT CAGTCGTCTC GCTCGTCATC
CTGATCCTGA TCGTGCTCTT CGCCTTCGCC GGCGGGCCCT TGTGGAAATA TTCCTATGCC
GTATCGACGT CCGACCTGTC GGCGCCGCCG AGCTGGGAGC ATCCCTTCGG GACCGATCAT
CTGGGCTACG ATCTCATGGC GGGCGTGATG CGGGGCACGC AGCGCTCGCT CTCCATCGCT
GGAACGGTGG CGGTGCTCGC CACGCTGATC GGCTCGATCT GGGGTGCGGT CGCCGGCTAT
GTCGGCGGCT GGGCGGACTC GCTCCTGATG CGGATCGTCG ATCTCATCAT GATTTTCCCA
CTCCTGGCGG TCGCCGCCTT CCTCGCCCGG CAGTCTCAGG GCGGGGAGCA CGGCTGGCTG
CTGGTGGCGC TCGTGCTGGC GACCCTCTCA TGGACGGTGC TGGCGCGTGT CGTGCGCTCG
GTAGTGCTCT CGCTTAGAAC GCGCGAATTC GTCATCGCGG CGAAGATCGC CGGAGCGGGG
CCGGTGCGCA TCATCTTCCG CCACCTGCTT CCGAACACGG TGGGGCCGAT CATCGTCGCG
GCCACGGTGC TGGTGGCGAG CGCCATATTG TCGGAGACCG CTCTTTCCTA CCTCGGCTTC
GGCGTGCAGC CTCCGGACAC CTCGCTCGGG CTCCTGATCA ACCAGGCCCA AGGTGCGATT
TCTACCCGCC CCTGGCTCTT CTACTTCCCG GGGCTCTTCA TCATCCTGAT CGCGCTCTGC
GTGGCCTTCA TCGGAGACGG CTTGCGGGCC GCCCTCGATC CCAAGCAGCA GAGGAAATGA
|
|---|
| Protein sequence | MSDRAVEIGQ APAQEQVYRP WRAIARKFFS YKASVVSLVI LILIVLFAFA GGPLWKYSYA
VSTSDLSAPP SWEHPFGTDH LGYDLMAGVM RGTQRSLSIA GTVAVLATLI GSIWGAVAGY
VGGWADSLLM RIVDLIMIFP LLAVAAFLAR QSQGGEHGWL LVALVLATLS WTVLARVVRS
VVLSLRTREF VIAAKIAGAG PVRIIFRHLL PNTVGPIIVA ATVLVASAIL SETALSYLGF
GVQPPDTSLG LLINQAQGAI STRPWLFYFP GLFIILIALC VAFIGDGLRA ALDPKQQRK
|
|---|
| |