Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1679 |
Symbol | rpsJ |
ID | 4179943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1796327 |
End bp | 1796635 |
Gene Length | 309 bp |
Protein Length | 102 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638067571 |
Product | 30S ribosomal protein S10 |
Protein accession | YP_674239 |
Protein GI | 110634031 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0051] Ribosomal protein S10 |
TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.00213683 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGAC AAAATATCCG TATCCGCCTC AAAGCGTTCG ACCACCGGGT GCTCGACGCC TCCACGCGTG AGATCGTGTC CACGGCCAAG CGCACCGGCG CGAATGTCCG CGGCCCCATC CCGCTGCCGA CGCGGATCGA GAAGTTCACG GTGAACCGCT CGACGCATAT CGACAAGAAG AGCCGCGAGC AGTTCGAGAT GCGCACTCAC AAGCGCCTTC TCGACATTGT GGATCCGACT CCGCAAACGG TGGACGCGCT GATGAAGCTC GATCTCGCCG CCGGTGTCGA TGTCGAGATC AAGCTCTAA
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Protein sequence | MNGQNIRIRL KAFDHRVLDA STREIVSTAK RTGANVRGPI PLPTRIEKFT VNRSTHIDKK SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KL
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