Gene Meso_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1679 
SymbolrpsJ 
ID4179943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1796327 
End bp1796635 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content61% 
IMG OID638067571 
Product30S ribosomal protein S10 
Protein accessionYP_674239 
Protein GI110634031 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01049] ribosomal protein S10, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00213683 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGAC AAAATATCCG TATCCGCCTC AAAGCGTTCG ACCACCGGGT GCTCGACGCC 
TCCACGCGTG AGATCGTGTC CACGGCCAAG CGCACCGGCG CGAATGTCCG CGGCCCCATC
CCGCTGCCGA CGCGGATCGA GAAGTTCACG GTGAACCGCT CGACGCATAT CGACAAGAAG
AGCCGCGAGC AGTTCGAGAT GCGCACTCAC AAGCGCCTTC TCGACATTGT GGATCCGACT
CCGCAAACGG TGGACGCGCT GATGAAGCTC GATCTCGCCG CCGGTGTCGA TGTCGAGATC
AAGCTCTAA
 
Protein sequence
MNGQNIRIRL KAFDHRVLDA STREIVSTAK RTGANVRGPI PLPTRIEKFT VNRSTHIDKK 
SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KL