Gene Meso_1677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1677 
SymbolrplD 
ID4179941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp1794902 
End bp1795522 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID638067569 
Product50S ribosomal protein L4 
Protein accessionYP_674237 
Protein GI110634029 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.375579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGA AGGTAACCAC CCTGGCGGGC AAGGATGCCG GCAAAGTTGA GGTCTCAGAC 
GAGATCTTCG GGCTCGACCC GCGTGAAGAC ATTCTTCATC GCGTGGTGCG CTGGCAGCTG 
GCCAAGCGCC AGCAGGGCAC CCACAAGGCC AAAGGCCGCG CGGAGATCGC CCGTACCGGC 
GCCAAGATGT ACCGCCAGAA GGGCACGGGT CGCGCCCGCC ATTCGTCGGC GCGCGCTCCG 
CAGTTCCGGG GCGGCGGCAA GGCTCATGGC CCGGTGCCGC ACAGCCATGC CCATGACCTG 
CCGAAGAAGG TGCGGGCACT GGGCTTGAAG CATGCGCTTT CGGCCAAGGC CAAGTCGGCT 
AACCTCATCA TTGTCGACGA TCTGGCAATC AAGGAGGCGA AGACCAAGGC GCTGGTCGAG 
AGCTTCGCCA AGCTTGGAGT GACCAACGCT CTCATGATCG GCGGCGCCGA GATCGACGCC 
GGTTTCAAGC GCGCGGCCGC CAACATTCCG AATATCGACG TGCTGCCGAT CCAGGGCATC 
AACGTCTACG ACATCCTGCG CCGCGGTACC CTGGTGCTTT CCAAGGCTGC GGTCGAGGCC 
CTCGAGGAGC GGTTCAAATG A
 
Protein sequence
MDLKVTTLAG KDAGKVEVSD EIFGLDPRED ILHRVVRWQL AKRQQGTHKA KGRAEIARTG 
AKMYRQKGTG RARHSSARAP QFRGGGKAHG PVPHSHAHDL PKKVRALGLK HALSAKAKSA 
NLIIVDDLAI KEAKTKALVE SFAKLGVTNA LMIGGAEIDA GFKRAAANIP NIDVLPIQGI 
NVYDILRRGT LVLSKAAVEA LEERFK