Gene Meso_1666 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1666 
SymbolrplE 
ID4180183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1790139 
End bp1790696 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content59% 
IMG OID638067558 
Product50S ribosomal protein L5 
Protein accessionYP_674226 
Protein GI110634018 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0094] Ribosomal protein L5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00489085 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAGG CAGGATACCA GCCACGCTTG AAGAAGCACT ATGAGGAAGC GATCCGAAAG 
CAGCTCCTCG AGACCTTCAA GTATGAAAAC GAGATGCAGG TTCCGCGCAT CGATAAGGTC
GTTATCAATA TGGGGGTCGG AGAGGCGACG GGCGATTCCA AGAAGCCGTC GGTAGCCGCC
GAGGACCTCG CGCTGATCGC CGGCCAGAAG GCGGTTATTA CCCGGGCGCG CAATTCGATT
GCCGGTTTCA AGGTGCGCGA GGGCATGCCC ATCGGCGCCA AGGTGACCCT GCGCAAGGAC
CGCATGTACG AGTTCCTGGA CAGGCTCGTG AATGTTGCGC TCCCGCGCGT CCGCGACTTC
CGGGGCTTGA GCCCCAAGAG CTTCGACGGC CACGGCAACT TCGCCATGGG CATCAAGGAG
CACATCGTGT TCCCCGAGAT CAACTACGAT AAAGTCGATC AGATCTGGGG AATGGACATC
ATCGTCTGTA CGACCGCCAA GACCGACGAC GAGGCGCGCG CCTTGTTGAA GGCTTTCAAC
TTCCCGTTCC GGCAGTAA
 
Protein sequence
MAKAGYQPRL KKHYEEAIRK QLLETFKYEN EMQVPRIDKV VINMGVGEAT GDSKKPSVAA 
EDLALIAGQK AVITRARNSI AGFKVREGMP IGAKVTLRKD RMYEFLDRLV NVALPRVRDF
RGLSPKSFDG HGNFAMGIKE HIVFPEINYD KVDQIWGMDI IVCTTAKTDD EARALLKAFN
FPFRQ