Gene Meso_1663 details

Gene Information

• Locus tag: Meso_1663
• Symbol: rplF
• ID: 4180180
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: -
• Start bp: 1788823
• End bp: 1789356
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638067555
• Product: 50S ribosomal protein L6
• Protein accession: YP_674223
• Protein GI: 110634015
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0799519
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTCGTA TAGGCAAGAA GCCGGTTCCG GTGCCACAGG GCGTGACAGC AAATGTCGAT 
GGCCAGGTGG TTACAGCCAA GGGACCGAAG GGCGAACTGA AGTTCGTCGT TAACGACGAT 
GTGCTGGTGA AGTTGGAAGA CGGTGCGATC GCCGTCGATC CGCGCAACGA GTCGAAGATG 
GCCCGTTCGA AGTGGGGCAT GTCCCGCACT CAGATCGCCA ACATCCTCAC CGGCGTGAAG 
GACGGCTTTG AGAAGCGGCT GGAGATCAAC GGCGTCGGAT ACCGCGCGGC GATGCAGGGC 
AAGAACCTGC AGCTTTCGCT GGGCTTCAGC CACGATGTGA GCTATGAGCC CCCGACGGGA 
ATCACGATCA CCGTGCCGAA GCCGACGGAA ATCGTCGTTA GCGGCATCGA TAAGCAGGTC 
GTGGGGCAGG TTGCTGCCGA GATCCGCAAG TATCGTGGGC CGGAGCCTTA CAAGGGCAAG 
GGCGTGAAAT ACGCGGGCGA GACGATCGTC CGTAAGGAAG GCAAGAAGAA GTAA 

 

Protein sequence

MSRIGKKPVP VPQGVTANVD GQVVTAKGPK GELKFVVNDD VLVKLEDGAI AVDPRNESKM 
ARSKWGMSRT QIANILTGVK DGFEKRLEIN GVGYRAAMQG KNLQLSLGFS HDVSYEPPTG 
ITITVPKPTE IVVSGIDKQV VGQVAAEIRK YRGPEPYKGK GVKYAGETIV RKEGKKK