| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1616 |
|---|
| Symbol | |
|---|
| ID | 4179822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1739828 |
|---|
| End bp | 1741189 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638067508 |
|---|
| Product | two component, sigma54 specific, Fis family transcriptional regulator |
|---|
| Protein accession | YP_674176 |
|---|
| Protein GI | 110633968 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTG ACATACTAGT CGTCGACGAT GAGGAAGACA TTCGCGAATT GGTCGCCGGA
ATCCTCAGCG ACGAAGGACA TGAAACCCGA ACGGCGGGGA ATAGCGATGC GGCACTGGCA
GCGATTGCAG AGCGTGTGCC GCGGCTGGTT CTGCTTGATA TCTGGCTTCA GGGCTCAACC
CTCGACGGGT TGGCGCTCCT CGATAAGATC AAGGAGATTC ATCCCGATTT GCCGGTGGTG
ATGATTTCCG GGCATGGCAC CATCGAGACC GCCGTCTCTG CGATCAAGCG CGGCGCTTAT
GATTTCATTG AAAAGCCGTT CAAGGCCGAC AGGCTGATCC TCATCTGCGA GCGCGCGCTC
GAGACTTCCA AACTTCGCCG CGAGGTGCTG GACCTCAAGA AACGCAGCGG CGAGAGCTTT
GATCTTGTCG GAAATTCGCC AGCGATCAAT CATCTGCGCC AGACGATCGA GCGTATTGCG
CCCAGCAACA GCCGCGTCAT GCTGATCGGT CCCTCAGGCT CGGGAAAGGA GCTGGCGGCG
CGGGCGATCC ACGCCCTGTC GAACCGGGCC GGCGCTCCCT TCGTGACCTT GAACGCCGCC
TCCATCACGC CGGAACGCAT GGAGATCGAA CTATTCGGAA CGGAATCGAA TGGCGGGGAA
CGTAAGGTTG GCGCGCTTGA AGAAGCTCAT CGAGGTACGC TCTATCTCGA CGAGGTTGCA
GACATGCCGC GCGAGACGCA GGGAAAAATC CTGCGCGTGC TCATTGACCA GCAATTTGAG
CGGGTAGGGG GTACGAAGCG GGTCAAGGTC GATGTACGCA TCATCTCCTC GACGGCCCGC
AACCTGGAGC GCATGATCGA GGAAGGGCGG TTCCGCGAGG ATCTCTACCA TCGCCTGGCC
GTGGTGCCCG TCGCGGTTCC CGCGCTTTCG GAACGGCGCG AGGACATTCC GTTGCTTGTC
GATCATTTCA TGCAGCAGAT TACAAGCCAG GTGGGAATCA AGTCGCGCCG GCTCGGCGAG
GATGCCATGG CGGTTCTCCA GGCGCATGAC TGGCCAGGCA ATATCCGTCA GCTGCGAAAC
AATGTCGAAC GGCTGATGAT TCTGACGCGT GGCGACGACG GTGATGACCC GATCACAGCC
GACCTCCTGC CTTCGGAAAT TGGCGACGTG ATGCCGCGTG TTCCCACCCA ATCGGACCAG
CATATCATGG CTCTGCCCTT GCGTGAGGCC CGTGAGCTGT TCGAGAAGGA ATATCTTCTT
GCGCAGATCA ATCGATTCGG CGGCAATATT TCTCGTACTG CCGAATTCAT AGGGATGGAG
CGTTCGGCGC TGCACAGGAA ACTGAAGTCG CTGGGCGTCT GA
|
|---|
| Protein sequence | MASDILVVDD EEDIRELVAG ILSDEGHETR TAGNSDAALA AIAERVPRLV LLDIWLQGST
LDGLALLDKI KEIHPDLPVV MISGHGTIET AVSAIKRGAY DFIEKPFKAD RLILICERAL
ETSKLRREVL DLKKRSGESF DLVGNSPAIN HLRQTIERIA PSNSRVMLIG PSGSGKELAA
RAIHALSNRA GAPFVTLNAA SITPERMEIE LFGTESNGGE RKVGALEEAH RGTLYLDEVA
DMPRETQGKI LRVLIDQQFE RVGGTKRVKV DVRIISSTAR NLERMIEEGR FREDLYHRLA
VVPVAVPALS ERREDIPLLV DHFMQQITSQ VGIKSRRLGE DAMAVLQAHD WPGNIRQLRN
NVERLMILTR GDDGDDPITA DLLPSEIGDV MPRVPTQSDQ HIMALPLREA RELFEKEYLL
AQINRFGGNI SRTAEFIGME RSALHRKLKS LGV
|
|---|
| |