Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_1613 |
Symbol | hfq |
ID | 4179819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 1737163 |
End bp | 1737411 |
Gene Length | 249 bp |
Protein Length | 82 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638067505 |
Product | RNA-binding protein Hfq |
Protein accession | YP_674173 |
Protein GI | 110633965 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAAC GTTCCCAAAA TCTGCAGGAT TTATTTCTCA ACACCGTTCG CAAGAGCAAG AACCCGCTGA CGATATTTCT GATCAACGGC GTGAAATTGA CAGGTGTGGT TACATCGTTC GACAATTTCT GTGTTCTTCT GCGCCGGGAT GGGCACTCAC AGCTTGTCTA CAAGCATGCG ATCTCCACGA TCATGCCCAG CCAGCCGGTG CAGCTGTTCG AGGCGGAGGA AGGTAGTCGG GAAGGCTGA
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Protein sequence | MAERSQNLQD LFLNTVRKSK NPLTIFLING VKLTGVVTSF DNFCVLLRRD GHSQLVYKHA ISTIMPSQPV QLFEAEEGSR EG
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