| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1536 |
|---|
| Symbol | |
|---|
| ID | 4180581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1652931 |
|---|
| End bp | 1655243 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638067427 |
|---|
| Product | malic enzyme |
|---|
| Protein accession | YP_674097 |
|---|
| Protein GI | 110633889 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTAA AGAAAACACG TTCGGACTTG GATGAGGCTG CTCTTTTTTT TCATCGTTAT
CCCGTGCCGG GAAAGCTGGA AATTCAGCCG ACGAAGCCCC TTGGCAACCA GCGTGACCTC
GCGCTCGCCT ACTCTCCGGG CGTGGCTGCG CCGTGCCTTG CGATTCACGA AGATCCGGCA
ACCGCCGCCG ATTATACCTC GCGGGCAAAT CTGGTGGGTG TGGTATCCAA TGGCACGGCC
GTGCTTGGCC TTGGTGATAT CGGACCGCTC GCCTCAAAGC CCGTGATGGA GGGCAAGGCA
GTCCTCTTCA AAAAGTTCGC CGGCATCAAT GTATTCGATA TCGAGATCGA TGCGCCGGAT
GTGGACCGCA TGGTGGAGAC CATCTCGGCA CTGGAGCCCA CCTTCGGCGG GATCAATCTG
GAGGACATCA AGGCGCCCGA ATGCTTTGAG GTGGAAGAGC GCCTCAAGGA GCGCATGAAA
ATCCCGGTTT TCCATGATGA CCAGCACGGC ACCGCGATCA TCGTTGCGGC TGCGGTGCTC
AACGGGCTGG AACTTGCCGG AAAGGATATC GCCTCCGTCA AAATCGTCAC TTCCGGCGCG
GGCGCAGCGG CGCTAGCTTG CCTCAACCTG CTCGTCTCGC TCGGCGTGAA GACGGAAAAT
ATCTGGATCA CGGACCGGCA TGGTGTCGCC TATCGCGGGC GCGTTGAGGA AATGGACCGG
TGGAAGGAAC CCTATCTCAA GGACACTGAG GCGCGCGAGC TTGCGGATGT CATCGATGGC
GCGGATGTGT TCCTCGGCCT TTCGGCAGGC GGCGTGCTGA AGCCCGAGAT GCTGAAGGGC
ATGGCGGAGC GGCCGCTCAT CCTGGCGCTC GCCAATCCCA ATCCGGAGAT CATGCCGGAC
GTTGCGCGCA AGGCGCGCGC GGATGCGATG ATTTGCACAG GGCGGTCGGA TTTCCCGAAC
CAGGTCAACA ACGTCCTTTG CTTCCCTTAT ATTTTCCGGG GCGCACTCGA TGTCGGCGCC
ACGGCGATCA ATGAAGAGAT GAAGCTTGCC GCAGTGCGCG CCATCGCCGC GCTCGCCCGC
GAGGAGCCTT CGGATGTGGC CGCCCGCGCC TATTCAACCG AGACACCAGT CTTCGGGCCG
GATTTTCTCA TCCCCTCGCC TTTCGACCCG CGGCTGATCC TCAGGATCGC CCCGGCGGTG
GCGAAGGCGG CCATGGAGTC GGGCGTGGCG ACCCGCCCGA TTGAGGAAAT GGATGCCTAT
CTGGACCGGC TGAACCGGTT CGTCTTCCGC TCCGGGCTTG TCATGAAGCC TGTCTTCTCG
ACGGCTAAGC AGATCGGACG AAAGCGCGTC ATCTACGCGG ACGGCGAGGA TGAGCGGGTG
TTGCGTGCGG CCCAGGTGGT GCTGGAAGAG GGACTTGCGC AGCCGATCCT TATCGGCCGC
CCGCATGTCG TGGAAATGCG TCTGAAGAGA TACGGCCTCA GGATCAAGCC TGGCGTCGAT
TTCGAGATTA TCAATCCGGA AGACGACCCG CGTTACCGAG ACTATGTAGA TCTCCTCATC
CGGATTGCGG GTCGGCGCGG CGTGACCACG GAGGTGGCGC GCACACTCGT GCGGACCAAC
GCCACCGTTA TCGCTGCGCT GGCCATCATG CGCGATGAGG CGGACGCGAT GATCTGCGGC
CTTGAAGGCC GTTTCGAACG GCATCTTCGA TATGTAGAGG CGATCATCGG CCGGCGCGAG
GGCGTACAGG ACCTTTCCGC GCTGTCGATG CTCATTACAC AGCAAGGCGT GGTGTTTCTT
ACCGATACCT ATGTGACGCT CGACCCCTCT GCGGCGGAGA TCGCGGAAAT GACGGTTCTT
GCCGCGGAGG AGATCCGCCG CTTCGGCATA GACCCCAAGG CGGCGCTTCT CTCGCATTCA
GATTTCGGCT CGCGCGACTC AGCAAGCGCG ATGAAAATGC GAGAGGCCGT CGGCATCTTG
CACCGCATCG CGCCGGATCT CATCGCCGAT GGCGAAATGC ACGGAGACGC CGCACTTTCA
GAGGAGCTGC GGCAGCGCGT CTATCCGCAT GCGCTGCTGA AGGGGGAGGC AAACCTGCTT
GTGTTCCCCA ACCTGGATGC CGCCAACATC ACGCTTACGA CGCTAAAGGT CATGACGGAT
GCGCTCCATG TAGGGCCGAT CCTGCTCGGC ATGGCCCGGC CGGCTCATAT CCTCACACCT
TCCGTCACCT CGCGCGGCAT CGTTAATATG ACGGCGCTTT CCGCGGTGGA GGCTCTACAG
AGCCAGAACA GACAACTGAA TCTGCCAGGC TAA
|
|---|
| Protein sequence | MVVKKTRSDL DEAALFFHRY PVPGKLEIQP TKPLGNQRDL ALAYSPGVAA PCLAIHEDPA
TAADYTSRAN LVGVVSNGTA VLGLGDIGPL ASKPVMEGKA VLFKKFAGIN VFDIEIDAPD
VDRMVETISA LEPTFGGINL EDIKAPECFE VEERLKERMK IPVFHDDQHG TAIIVAAAVL
NGLELAGKDI ASVKIVTSGA GAAALACLNL LVSLGVKTEN IWITDRHGVA YRGRVEEMDR
WKEPYLKDTE ARELADVIDG ADVFLGLSAG GVLKPEMLKG MAERPLILAL ANPNPEIMPD
VARKARADAM ICTGRSDFPN QVNNVLCFPY IFRGALDVGA TAINEEMKLA AVRAIAALAR
EEPSDVAARA YSTETPVFGP DFLIPSPFDP RLILRIAPAV AKAAMESGVA TRPIEEMDAY
LDRLNRFVFR SGLVMKPVFS TAKQIGRKRV IYADGEDERV LRAAQVVLEE GLAQPILIGR
PHVVEMRLKR YGLRIKPGVD FEIINPEDDP RYRDYVDLLI RIAGRRGVTT EVARTLVRTN
ATVIAALAIM RDEADAMICG LEGRFERHLR YVEAIIGRRE GVQDLSALSM LITQQGVVFL
TDTYVTLDPS AAEIAEMTVL AAEEIRRFGI DPKAALLSHS DFGSRDSASA MKMREAVGIL
HRIAPDLIAD GEMHGDAALS EELRQRVYPH ALLKGEANLL VFPNLDAANI TLTTLKVMTD
ALHVGPILLG MARPAHILTP SVTSRGIVNM TALSAVEALQ SQNRQLNLPG
|
|---|
| |