| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1513 |
|---|
| Symbol | |
|---|
| ID | 4180636 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1612960 |
|---|
| End bp | 1615878 |
|---|
| Gene Length | 2919 bp |
|---|
| Protein Length | 972 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 638067404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_674074 |
|---|
| Protein GI | 110633866 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAATA AGTCCAATTT CTTCAACAGA ACCCAGATGG GTGGAAATGG GCGAGGGATC
GCCAGGATTT CCGGCTATCT GGCGGGTGCG GCGCTGGGGG TGGCCGCGCT CGCATCGCCC
GCCCTGGCGG CAATGCCGCC CGCAGGATTT GCAATCGGCA ATAAGGCGCA CGTCTCATTC
GAGGTCGACG GTACACAGTT AAGCGCAGAG TCAAATCTCG TGCAGACGAT CGTCAATACC
GTATCGGGTG TCACCATCAG CGATGCCGCG CCGGTGGACG CTATTCCCGG CACTTTGGCT
CCCGGCTTTT TCCATGTCAT AACGAACAAA GGAAACGGTC CCGAAGCATT CGACATAGTC
GTAAGCCAAT ACACGGCAAA CGTCGTCAAC CCGGTTACTA TTTATCAGGC CGATTGCGCA
ACTGGCCTGC CCAGCACAAC AGCACTGGTC GCTCCATTCA AAACCCCGGA GCTGCTGCCG
GACAAATCCT TCTGTATTTC TGTGGTAGCG GGACTGATGA GTTCCGCCGT TGTTGGGACG
CCGGAGAGCT TTCAAATTTC GGCGGTGGCA ACCAACACAA ATGCTTCCAA CTACAATGCT
GGTCCGCCGA TCACGCCGAG AGATGATACC ACCGATGTCA TCAATCCCAC AAACGGGCCG
GTTCTATCGC TTGTAAAAAG TTACGTGGAC ATCAATGGCG GCGATGTCGT GCCTGGCGAC
AGGCTGCGCT TCAGGATAGC ATATAGAAAT ACGGGGGCCA CAGGCGCAGA CGCACAAAAT
GTCAATATCA CCGACAGCTT GGTGCCCGGG CTGATATATC AAACCGGCAC TGGCATGTGG
AACGGCACGG TTGCCCTTAC GGAAAACTCC ACAACGCCAC CCAGCAACGG TGTAACGCTC
ACGTACAATT ACGCCACTCA GAACAGCCAG GTAAGTGCGC TGCTAAACAC CGTTCGCGCC
CAGACAAGCG GCTTCTTCGA ATTCGAAGTG GTCGTTGCGC TGAATGTCGC CAGCGCAACA
TTGACCAACC AGGCTGAGGC AGTCTTCGAT GGACATCCAG ATCCGGTAGA GTCGAACGAG
GTGCTTATCC CGATCAACGC TGTCGATACA GTCAGCGTGG TCTTGGCTGA CAGCTCTCCA
AATCCCGCGG TCGCACACAC ACAAGACCTG CCGGATAACA ATCTGAGCGG TAATGATGCG
TCGGCCACCG ATGAAGAGAC GAACCACACG AACGACCAGG TTGTACAACT GACCGCCATT
GCTGAAGGCG CTCTTCTGGT ACAAGAGTTC GTTCTCACAA ACACCTCCAG TACCGATCAG
CTTTTTAATC TTACCTCTTC CCTGGACGGA GGACCGCGAT ACCCCAATCC CAGCGCAACA
CAGCCGCATC AGCCTCTGCC GCCAGGGACG CGGATCGTAT TCGCCGACTA CAATCTCTAC
GACGACGACA ATAGCGGCCA ACCGGACGTT CTTGTCCCCG CCAACCAAAC CATAAAGCTG
CGGGTCTTCA TCTATCTCCC GGCTGGCTAT ACGCGTGCGG CCGGCGCAGA TCCTTGGGTC
GGCCGGGTAA CGGCAACCTC GAGATTCACT GACGCGGAAA ATCCTGATCC GAACAGACCC
GACCTCACCA ACAGTTCATG GATTGTAATT CGCGGCGATG TGCTTGCTTC GAGGGTCGAC
CTCTTGAACA GGGATGGCAC CAATCTCATC GCCGATGGCA GCAATACGAC CAGGCCTGAT
GGAAGCCCGT GGCTCAATAT CAATGCAGAT CCCGGCGCTA AAGTTGAATT CCCGCTCGTG
GTGCAAAACG AAAGCTTATT GTCCGATAGT TTCCAGCTTT CGTTCAGCGC GACCAACGCT
CCATTTGTGC CTGGAAGCAC TCCTCTTGGC TATACCGTTC GTCTTCTTGA CGCCAGTAGG
AATCCCCTGA GTAACGGGAA CACCGGTCTG ATAGGCCCCA ACTCCTCCAG AGACTTCATT
GCAGAAGTCA CAGTTCCTCA ATCCGCGAGA CCTGGAACTG TCAATTTCTA CTTCCGAGTA
CAAGGCGTGA GAAATCCTGC CCTTATGGAC ACGAAGCTCG ACGCAGTGAC GGTCAATAGG
GTTGGAAATC TTGCGATCAA GCAAGATCAG CCTGGGGCCA CAGCTCCTGG AATGGCATGG
GTCTTCAGTC ACGTCATGTC CAACTTGGGC AATGTCACCG TTGTCGACAG TACAATTAGC
TATGATCCGC CATTCCCGAC CTTTGATGAG GCACTTTATG CGGACCTCAA CGGCAATGGC
ATCCTGGATA CGGCTGAATT GAGCGCACAG CCAATCACGG GCGTACGTGA CATCTGGAAC
CGGCTTCCAG CGAATTCACC CCTGAAGCAG ATTGATCCAG CTCGTGGCCT TACTGAATTT
TTTGACCCGG GAGAGTCGAT CATCCTGTTC GGTCGGGTTA CACCTCCGCC CGGCGCACTT
CCCACGACCA CCGAGATCGG AACCGTCTAT GTCAACGTAA GCCTTGAAGA CATGAGCGGT
AACATTATTC AAGACGTTCA GCCCAGCAAT AACAGGGCGG ACGAGGCCTT GACGGTGGTC
GATTCACCGA TCGTTCCGAT CAAGGAGCAG GCACTTGACA GGGGTTGCAA CGGGACGGTT
GACGTGCCGT TTACGATGGG CAAGCTCCAG GGTGACCCCG GCGACTGCAT CCAGTATAGG
GTAACTGTCA ACAATAACGG CGGAAACCTC GTGAACCAGG TCACGATTGA CGACAAGGTT
CCGCTGTATA CGACGCTCTC CACGGCGGCC CAGGTCACTC CGGGCCAGAT CGCCGCGCAG
CCCGCAATAG GAGCTACGGG CAACATAATT GCCAATGTCG GTACACTGAA CGGAAATTCA
AATGCGGTCC TGACGTTCAC CGTCAAGATC GACCAATAA
|
|---|
| Protein sequence | MPNKSNFFNR TQMGGNGRGI ARISGYLAGA ALGVAALASP ALAAMPPAGF AIGNKAHVSF
EVDGTQLSAE SNLVQTIVNT VSGVTISDAA PVDAIPGTLA PGFFHVITNK GNGPEAFDIV
VSQYTANVVN PVTIYQADCA TGLPSTTALV APFKTPELLP DKSFCISVVA GLMSSAVVGT
PESFQISAVA TNTNASNYNA GPPITPRDDT TDVINPTNGP VLSLVKSYVD INGGDVVPGD
RLRFRIAYRN TGATGADAQN VNITDSLVPG LIYQTGTGMW NGTVALTENS TTPPSNGVTL
TYNYATQNSQ VSALLNTVRA QTSGFFEFEV VVALNVASAT LTNQAEAVFD GHPDPVESNE
VLIPINAVDT VSVVLADSSP NPAVAHTQDL PDNNLSGNDA SATDEETNHT NDQVVQLTAI
AEGALLVQEF VLTNTSSTDQ LFNLTSSLDG GPRYPNPSAT QPHQPLPPGT RIVFADYNLY
DDDNSGQPDV LVPANQTIKL RVFIYLPAGY TRAAGADPWV GRVTATSRFT DAENPDPNRP
DLTNSSWIVI RGDVLASRVD LLNRDGTNLI ADGSNTTRPD GSPWLNINAD PGAKVEFPLV
VQNESLLSDS FQLSFSATNA PFVPGSTPLG YTVRLLDASR NPLSNGNTGL IGPNSSRDFI
AEVTVPQSAR PGTVNFYFRV QGVRNPALMD TKLDAVTVNR VGNLAIKQDQ PGATAPGMAW
VFSHVMSNLG NVTVVDSTIS YDPPFPTFDE ALYADLNGNG ILDTAELSAQ PITGVRDIWN
RLPANSPLKQ IDPARGLTEF FDPGESIILF GRVTPPPGAL PTTTEIGTVY VNVSLEDMSG
NIIQDVQPSN NRADEALTVV DSPIVPIKEQ ALDRGCNGTV DVPFTMGKLQ GDPGDCIQYR
VTVNNNGGNL VNQVTIDDKV PLYTTLSTAA QVTPGQIAAQ PAIGATGNII ANVGTLNGNS
NAVLTFTVKI DQ
|
|---|
| |