| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1435 |
|---|
| Symbol | |
|---|
| ID | 4179357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 1530816 |
|---|
| End bp | 1531694 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638067324 |
|---|
| Product | TonB family protein |
|---|
| Protein accession | YP_673996 |
|---|
| Protein GI | 110633788 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
|---|
| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGGA AGCGGTCCCA CTGGATGCTG GCAGTCGGTG CCTCCTGCGT CATCCATGCG
GGCGCGGCCG CGCTGATCGA GCCTTCCAAG GAAGAGGTGC TGGTCGAGAG TGGCGGAAGC
GGCGTGATCG TGCTCGGCAA CAATGTCTTC GCGGACATGT CCGCCATGGG CGAGGAATCG
GAAATCGTGG AGCCGGAGAC GGAGATCCCG GCGGCGATTG TGCCGCCGGA GCCGACTGTC
ACCGCGCCGG AGCCGGCCGA ACCTTCGCCC GCTGATATCG CCGTACCGGC GGAGACAACA
GAGCCCTTGG GGCCTGAGGA GGAGGTGGCG ATGCTGCCCA TCCCGCGGCC GACACCCCGC
CCGCATTACA CTCCACCGAA GGTCGAGCCG CGCCAAGGCC AGCCGCCCAG GCAGGCCCCC
TCCCCGCGCC AACAAACCGA GGAAAGAAAG GAAAGTCCGA AACGGCAGGC CACGTCACGT
GGTTCGCGCG GTCAGAACAC GCAAAATGCA AGGCGCGGTT CATCGGAAGG CAGCCGGACG
GCAAGCGGAA CGGAAAGCCA GGGGCCGGGG CGTTCACGGC AAACCGGCAA TGCCGCAACT
TCCAACTACC CAGGAAAGAT CGTCGCGAAA TTGCGCCGTT CGCTGCGCTA TCCGCGCGAA
GCCCGGCGGC AGCGCCTCGG TGGGGAGGTG CGCGTCGCAT TTACGGTAAC GCAGGACGGA
CGGGTAAGCG GCATTCGCAT CGTGCGCAGC TCCGGCTCGC CTGTTCTGGA CCAAGCAGCC
CTCGAGACGG TCCAGCGAGC GGCCCCTTTT CCCAAAATAC CGGCCGAAGC GGGCCGACCA
TCGTGGCCCT TCACGGTCCC CCTCGAGTTC AAACGTTGA
|
|---|
| Protein sequence | MKWKRSHWML AVGASCVIHA GAAALIEPSK EEVLVESGGS GVIVLGNNVF ADMSAMGEES
EIVEPETEIP AAIVPPEPTV TAPEPAEPSP ADIAVPAETT EPLGPEEEVA MLPIPRPTPR
PHYTPPKVEP RQGQPPRQAP SPRQQTEERK ESPKRQATSR GSRGQNTQNA RRGSSEGSRT
ASGTESQGPG RSRQTGNAAT SNYPGKIVAK LRRSLRYPRE ARRQRLGGEV RVAFTVTQDG
RVSGIRIVRS SGSPVLDQAA LETVQRAAPF PKIPAEAGRP SWPFTVPLEF KR
|
|---|
| |