| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_1365 |
|---|
| Symbol | gatA |
|---|
| ID | 4181560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 1457103 |
|---|
| End bp | 1458584 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638067254 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_673926 |
|---|
| Protein GI | 110633718 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0563452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC TTACGAAACT CACCATTTCG GAAATCCGAG CCAAACTGGC CGACAAGGAG
TTCACGGCGC TGGAATTGAC GGAGGCGTAT CTTTCGGCAA TCCAAACGGC GAATGAGAAG
CTGAACGCCT ATATCACGGT GACGGCGGAC AAGGCGCGGG AGATGGCCAA GGCTTCGGAC
ATGCGCCTCA TGCAGGGCGG CGCGCGGCCG CTTGAAGGCG TGCCTCTCGG AATCAAGGAC
CTTTTCGCCA CGGAAGGCGT GCACACCCAG GCCTGCAGCC ACATTCTCGA TGCGTTCAAG
CCCCGTTACG AATCGACTGT CACGACCAAT CTCTGGGCCG ATGGCGCAGT GATGCTCGGC
AAGCTCAACA TGGACGAGTT CGCCATGGGC TCCTCCAACG AGACTTCTTA CTACGGCCCG
GTGGTAAACC CTTGGCGCGA GGAAGGCGGC AACAAGGATC TCGTGCCCGG CGGCTCTTCG
GGCGGCTCGG CCGCGGCGGT TGCGGCCTGG CTTTGCGCGG GAGCCACCGC GACCGATACG
GGCGGGTCGA TCCGGCAACC GGCGGCCTTC ACCGCGACGG TGGGCATAAA GCCCACTTAT
GGGCGCTGCT CGCGGTGGGG GATCGTCGCC TTCGCATCCT CGCTGGATCA GGCGGGGCCG
ATCGCGCGCG ATGTGCGGGA CGCGGCAATC CTTCTGAAGT CCATGGCCTC GGTCGATCCC
AAGGATACGA CGTCGATCGA CATCCCCGTG CCGGATTACG AGGCCGCGAT CGGCCAGTCG
GTGAAAGGGC TGAAGATCGG CATTCCGAAG GAGTACCGGG TCGAAGGCAT GCCGGCCGAG
ATCGAGGCGC TTTGGCATAA AGGAATCGAG TGGATGCGCG ATGCCGGCGC CGAGATCGTC
GATATCTCTC TGCCGCACAC GAAATACGCG CTGCCGGCCT ATTATATCGT CGCGCCGGCG
GAGGCTTCGT CAAACCTGGC GCGCTATGAC GGCGTGCGTT ACGGGCTGCG GGTGCCTGGC
CGCGACATCA CCGAGATGTA CGAGAATTCG CGGGCGGCGG GCTTCGGTCG CGAGGTCAAG
CGGCGCATCA TGATCGGCAC CTATGTGCTG TCTGCCGGTT ATTACGATGC CTATTACCTG
CGCGCGCAGA GGGTGCGCAC GCTGATCAAG CGCGATTTTG AGCAGGCCTT CGAGGCGGGC
GTTGATGCGA TCCTCACACC GGCGACCCCT TCGGCGGCGT TCGGCATTGC CGACCAGGAA
ATGAACGCGG ATCCTGTGAA GATGTACCTG AACGACATTT TCACCGTGAC GGTGAACATG
GCGGGCCTGC CAGGCATCGC CGTACCGGCG GGGCTCGATT CCAGGGGCCT GCCGCTCGGA
CTTCAGCTCA TTGGCCGCGC CTTCGACGAG GAGACGCTGT TCCGCACGGC TCACATAATC
GAGCAGGCCG CGGGTAAATT CGAGCCGAAG CGCTGGTGGT AA
|
|---|
| Protein sequence | MTELTKLTIS EIRAKLADKE FTALELTEAY LSAIQTANEK LNAYITVTAD KAREMAKASD
MRLMQGGARP LEGVPLGIKD LFATEGVHTQ ACSHILDAFK PRYESTVTTN LWADGAVMLG
KLNMDEFAMG SSNETSYYGP VVNPWREEGG NKDLVPGGSS GGSAAAVAAW LCAGATATDT
GGSIRQPAAF TATVGIKPTY GRCSRWGIVA FASSLDQAGP IARDVRDAAI LLKSMASVDP
KDTTSIDIPV PDYEAAIGQS VKGLKIGIPK EYRVEGMPAE IEALWHKGIE WMRDAGAEIV
DISLPHTKYA LPAYYIVAPA EASSNLARYD GVRYGLRVPG RDITEMYENS RAAGFGREVK
RRIMIGTYVL SAGYYDAYYL RAQRVRTLIK RDFEQAFEAG VDAILTPATP SAAFGIADQE
MNADPVKMYL NDIFTVTVNM AGLPGIAVPA GLDSRGLPLG LQLIGRAFDE ETLFRTAHII
EQAAGKFEPK RWW
|
|---|
| |