Gene Meso_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1308 
Symbol 
ID4181620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1399035 
End bp1399919 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID638067196 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_673869 
Protein GI110633661 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.258741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAA TCGCCTTTAT CGGCCTCGGA AACATGGGAA ACCCGATGGC CGCCAACCTG 
GTCAAAGCCG GGCATGAGGT GAATGGCTTC GATCTCTTGC CCGAGAATCT TGCAAAAGCG
GAAAAGAGCG GCGTTTTCCG GGCGGAGAAC GCGCAGAAGG CAATCGAAGG TGCTGATGCG
ATCATCACCA TGCTGCCGGC GGGCAAGCAT GTGCTCACGG TCTATGAGGA CATCCTGGCC
AAGGCGGCGG CGGGCACGCT CTTCATCGAT TCATCGACCA TCGACGTCGC CTCGGCGCGA
GTGGCCCACT TGATGGCCCG CAAGCACGGT CATCTGTCTG TCGATGCACC CGTTTCCGGC
GGGGTGGTCG GAGCGGAAGC GGGCAGCCTG ACCTTCATGG CCGGAGGCTC CGCTGAGGCC
TTCGCCAAGG CCGAGCCCAT CTTGAAGCCG ATGGCCGGCC GCATCGTTCA TTGCGGCGAT
GGGGGTGCCG GCCAGGCCGC GAAGATCTGC AACAATATGA TCCTGGGCAT CTCGATGATC
GGCGTCGCGG AAGCCTTCGT GCTGGCGGAA AAGCTCGGAC TTTCGCACCA GGCCCTCTTT
GAGGTGGCGT CGGCTTCATC GGGCCAGTGC TGGTCGCTGA CAACCTATTG CCCGGTGCCG
GGGCCGGTGC CGACCTCCCC CGCCAACCGG GACTACCAGC CAGGCTTTGC CACAAGCCTG
ATGCTCAAGG ACCTGCGCCT TGCCCAGGAG GCCGCGCAGA CGGCCGGCGC CGTAACCCCG
CTCGGAGCCG AAGCGGCGCA GATCTATGCG CTCTTCGATG CGATGGGCCA AGGCGGACGG
GACTTTTCAG GCATCATAAG CTTGCTGCGC GGCACTACCA AATGA
 
Protein sequence
MTKIAFIGLG NMGNPMAANL VKAGHEVNGF DLLPENLAKA EKSGVFRAEN AQKAIEGADA 
IITMLPAGKH VLTVYEDILA KAAAGTLFID SSTIDVASAR VAHLMARKHG HLSVDAPVSG
GVVGAEAGSL TFMAGGSAEA FAKAEPILKP MAGRIVHCGD GGAGQAAKIC NNMILGISMI
GVAEAFVLAE KLGLSHQALF EVASASSGQC WSLTTYCPVP GPVPTSPANR DYQPGFATSL
MLKDLRLAQE AAQTAGAVTP LGAEAAQIYA LFDAMGQGGR DFSGIISLLR GTTK