Gene Meso_1302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_1302 
Symbol 
ID4181614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp1395206 
End bp1395901 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content60% 
IMG OID638067190 
Productexopolysaccharide synthesis, ExoD 
Protein accessionYP_673863 
Protein GI110633655 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCTTA TCGCTTGGCG GCGCTTGCAA CGAAATAGCT TGAAACAGAA CCGGTTGAAC 
GAGGAAGGAA GCGCACTGGA GAGATTGTCG GCACATTATC CACCGCCACG GCGCCTGTCC
CAGATATTCG AAGATCTAGT GCATAATGCG CAGGGAACGG CGATCACCGT GGATCAATTG
CGAAATGCGC TGGGTGAGCG CAGCTTCGCG ACGTTTCTTG TCTTCTTCGC GTTGCTCAAT
ATGCTTCCGC TGCCGCCGGG CAGCACGCTT GTGCTGGGTA TTCCTCTCCT GCTCATCTCG
ATCCAGATGG TGCTGGGTCG CAGCACGGTG TGGCTTCCAC ATTCGATCCT GACGAAGTCG
GTGGGCGTGG AGCAATTTCG CCAGATGAGC GAAAAGCTCG GCCCCAAGGT GAAACGGGTG
GAGCGCCTGA TCCGCCCGCG CTACTGGCCG TTCGCTCCGG GCCAGGCGGA TCGCGCAGTC
GGCCTCTGCG CCCTCTTTCT GGGCGTCCTC ATCACACTGC CGATCCCGTT CGGCAACTGG
TTCCCGGCGC TTGCCTGCGC GCTACTCGGC CTAGCACTCT CCGAATGTGA CGGGCTTCTG
CTCGGGATCG CCGTCGCAGT CGGGCTGTTT TCGCTTGTCA TTGTGGGCGT CATTTTCGGC
AGTGCGGGCG CCCTCGCAGC ATTTTTCATA CTGTAG
 
Protein sequence
MLLIAWRRLQ RNSLKQNRLN EEGSALERLS AHYPPPRRLS QIFEDLVHNA QGTAITVDQL 
RNALGERSFA TFLVFFALLN MLPLPPGSTL VLGIPLLLIS IQMVLGRSTV WLPHSILTKS
VGVEQFRQMS EKLGPKVKRV ERLIRPRYWP FAPGQADRAV GLCALFLGVL ITLPIPFGNW
FPALACALLG LALSECDGLL LGIAVAVGLF SLVIVGVIFG SAGALAAFFI L