Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0969 |
Symbol | |
ID | 4179761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 1064418 |
End bp | 1066028 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638066849 |
Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
Protein accession | YP_673531 |
Protein GI | 110633323 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAC GCATCTATCT CTTCGATACC ACCTTGCGCG ACGGACAGCA GACTCCGGGC GTGGACTTTT CCGTTGAGGA CAAGATCGCC ATCGCGCAGC TGCTCGATGA GCTCGGCGTT GATTATGTCG AGGGCGGATA TCCCGGCGCC AACCCGACCG ACACGGAGTT TTTCTCCAAA AAGCGCACGC GACGCGCCGC CTTCGTGGCG TTCGGAATGA CAAAGCGGCC GGGGATCTCT GCCGCCAACG ATCCGGGCCT TGCGGCGCTT ACGCAAGCTG AGAGCGATGC GGTCTGCTTT GTCGCCAAAA GCTGGGATTA TCACGTGCGG GTCGCCCTCG GCGCGACCAA TGAAGAGAAT TTGGAGTCAA TCCGCTCTTC CGTGGCTGCT GCGCGCGCGG CCGGAAGGGA AGCCATAGTC GACTGCGAGC ACTTCTTCGA CGGCTACAAG GCCAATCCGG ACTACGCGCT CGCCTGTGCG CTAGCCGCCT ATGAGGCGGC GTGCCGCTGG GTGGTGCTAT GCGACACCAA CGGCGGAACG CAGCCGAGGG AAGTGCGCGA GATCGTGTCG GCGGTCATCG CAGCCGGCAT TCCCGGCTCG CATCTTGGCA TCCATGCCCA TGACGATACC GGCCAGGCGG TCGCGAATTC CCTGGCCGCG GTCGAGGCGG GCGTAAGGCA GATCCAGGGC ACCCTTAACG GCATCGGCGA GCGGTGCGGG AACGCCAATC TCGTCACGAT CATTCCCACG CTGATGCTCA AGCCGGTCTA TGCCGAACGC TTCGAGGTGG GCATAGCCGA GGACGAGCTG AAACGCATCT CGCGCATTTC GCATGCTTTC GACGAGCTCC TGAACCGGGC GCCCGATACG CAGGCGCCCT TTGTGGGCAC GTCCGCCTTC GCGACCAAGG CGGGAATCCA CGCCTCGGCG ATCCTGAAAG ACCCGCAGAC CTACGAGCAT GTGCTGCCTG AGCGGGTAGG CAACACGCGA CGGGTGATGG TCTCTGACCA GGGAGGAAAG TCCAACTTCA TCGCCGAGCT TACACGGCGC GGGATTCAGG TGGAGAAGGC AGATCCCCGG CTCGACACGC TGATTGCGCT GGTGAAGGAG CGCGAGGCGC AAGGCTATGC CTATGAGGGC GCGGATGCGA GCTTCGAGCT TCTGGCGCGC CGCATACTTG GAAAGGTGCC CGAATTCTTC AAGGTGGATG GCTTCCGCTG CATGGTGGAG CGCCGGTTCG ACGCCAATGG CAACCTGAAG ACCGTCTCCG AGGCTGTAGT GCGCGTGACG ATCGACGGGG AGACGCGGCT CTCGGTCGCG GAAGGGCACG GCCCCGTGAA CGCGCTTGAC GTCGCGCTTC GGAAGGACCT CGGCAAATTT CAGTCGGAAA TCGAGGATAT GACCCTTACG GACTATAAGG TGCGGATCCT CAATGGCGGC ACCGAGGCCG TCACGCGCGT TTTAATCGAA TCCCATGACG CTGCGGGGGA CCGCTGGTGG ACCGTGGGCG TTTCCGACAA CATCATCGAT GCGTCCTTTC AAGCGCTGAT GGATTCCATT GTCTATAAGC TGGTGAAGAA CCGGGAAAGG ACCGGCCTCG CGGCCGAATG A
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Protein sequence | MKERIYLFDT TLRDGQQTPG VDFSVEDKIA IAQLLDELGV DYVEGGYPGA NPTDTEFFSK KRTRRAAFVA FGMTKRPGIS AANDPGLAAL TQAESDAVCF VAKSWDYHVR VALGATNEEN LESIRSSVAA ARAAGREAIV DCEHFFDGYK ANPDYALACA LAAYEAACRW VVLCDTNGGT QPREVREIVS AVIAAGIPGS HLGIHAHDDT GQAVANSLAA VEAGVRQIQG TLNGIGERCG NANLVTIIPT LMLKPVYAER FEVGIAEDEL KRISRISHAF DELLNRAPDT QAPFVGTSAF ATKAGIHASA ILKDPQTYEH VLPERVGNTR RVMVSDQGGK SNFIAELTRR GIQVEKADPR LDTLIALVKE REAQGYAYEG ADASFELLAR RILGKVPEFF KVDGFRCMVE RRFDANGNLK TVSEAVVRVT IDGETRLSVA EGHGPVNALD VALRKDLGKF QSEIEDMTLT DYKVRILNGG TEAVTRVLIE SHDAAGDRWW TVGVSDNIID ASFQALMDSI VYKLVKNRER TGLAAE
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