Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0712 |
Symbol | |
ID | 4180190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 784426 |
End bp | 786459 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638066591 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_673277 |
Protein GI | 110633069 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGCTAA CCAGGGCAAC ACTTAAAGCG ACGGCGGCAC TCGCGGTCTT CATGGCATTT TCCGCGCAGG CCGGGGTCGC CAAGGAAACT GGGGATACGG CCGGCCCGGT TCAGACCCTC ACTTTCTCGG GTGCTTATCT GGCAGGGCGA GCGGCCGAGT TTGACGACGA CCTGAAGAGC GCTGTGACCT ATTACGAGCG CGCGCTCTCG CTCGATCCCG ACAATACGGA TCTGCAGCGC ACTTTGCTGC TGGCGCTGGT ATCGCAAGGC GAGGTGGACA AGGCGCTTCC CTACGCGGAC AAGCTGAAAG CCGTTCCGGA GGTGGAGCGC TTCTCCCGCC TCACGCTTGC GGTCGATTCG TTCCGCAAGA ACGATTTTGC TGCGGCCGAG CGCTGGTTGA ACCTCGTTCT GGAATCGGAT CTCGACCGCC TCATTACCGG CATCATGACG AGCTGGGCGA AGGTGGGGCA GGGCGATGCG GACGGCGGGC TCACGAGCCT GGAGAATCTG AGCGGCCCGC CGTGGTATGA GCTGTTCAAG GCCTATCACC GTGCGCTCAT TCTGGCCAAT GAGGGGCGTA CCGAAGAGGC GGATGCAGCC TTCGACCAGG TGATCAGCGA GCTTGCTCCA CGCTCTGTGG CGCCGGACAC TCTTGGCCGG CTCGCCGAGG TCTATGCCTC CTATTTGTCG AGCCGCGGCG AGAAGGAGCG TGCGCTTGCT GTCCTCCAGC AGGCAGAGGA GACTGGCGGC GGTATCGCGA CCATTCCGGA ACTTCGCGCC AAACTGGAAA CTGGCGGGAA GCTCGATTCG GTCGTGGCGA ACGCCTCGGA TGGAGCGGCC GAGATCCTGC TCAATGTCGC CACCGAGCTC GCGAGCGGTG GTGGTGATTC CTATGTCCGT GTCTATCTGC AGCTTGCTCG TGCGCTGCGC CCGCATGGCG ACGCCGTTCT CGTGCAGCTT GCCCATGTTG CCGAGCGGCA GCAGGATGGC GAAGGGGCGA TCGCGATCTA TCGCATGATC GAAAAGGATT CTCCCTGGAC GCGCTTTGCG GAATTTCAGA TCGGCCTCAA CCTGGCCGAC CTTGAGCGGA ACGATGAAGC GGTCGCGCAT CTGAAGAAGG TTTTGGAAGC CGACCCCAAG GACCTGCGCG CCTATCTCGC CCTGGGCGGC GTCTATTCCA GCCAGAAGAA CTACAAGGCG GCCGCCGAAC TCTACGATGA TGCAGTGGCT GAAATTCCGG AGCCGGGGCG CGAGCACTGG AACATCTTCT ATCAGCGCGG CATCGCCTAT GAGCGGCTTA AGGAGTGGCC CAAGGCCGAA CCCAATTTCA AGAAGGCGCT GGAGCTTTAT CCCGATCATC CCCAGGTGCT GAATTATCTC GGCTATTCCT GGATCGACAT GAACATGAAC CTCGAAGAGG GCATGGAACT GATCAAAAAG GCGGTGGAGC TGCGGCCAAG TGACGGCTAC ATCGTCGATT CGCTCGGCTG GGCCTATTAC AAGCTCGGCC AGTACGACGA AGCGGTGGAG CATCTGGAAC GGGCGGTTTC CTTGCGTCCG GAAGATGCGG TCCTGAACGA CCATCTGGGC GACGTTTATT GGCGCGTCGG CCGCCATCTC GAAGCGCGCT ATCAATGGTC GCAGGTAAAG ACCCTTGAGC CTGAGCCCGA CCTTCTGGCC CAGATCGAGG AGAAGTTGAA GAACGGCCTG CCGCCCGTGG ATGGCGAGAA GGTGGCTGAC GCTGCAGGCA ACGCACGCAC CGTCAGCGAC GGCGCGCCCT CCGAGCCTGC CCGGCAGCCG GAGCAGCCGC AGGCCCAGCC GGCCGCGCCC GCTGAGCCCG CGCAAGGCGC AACTGCCGAG ACGGAGGCTA CCTATAGGGT AAAGCCCGGC CAGTCCCTCT GGTCGATCGC CGTCGAGGAA CTGGGCAATG GCGAACGCTT TCGCGAGATT CTCGATTTGA ACCCGGTCCT GAGGGGTGAT CCCAACCGCA TCAGGCCTGG CCTGGAACTG AAGCTGCCGA CAGCGGGGCA GTAG
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Protein sequence | MRLTRATLKA TAALAVFMAF SAQAGVAKET GDTAGPVQTL TFSGAYLAGR AAEFDDDLKS AVTYYERALS LDPDNTDLQR TLLLALVSQG EVDKALPYAD KLKAVPEVER FSRLTLAVDS FRKNDFAAAE RWLNLVLESD LDRLITGIMT SWAKVGQGDA DGGLTSLENL SGPPWYELFK AYHRALILAN EGRTEEADAA FDQVISELAP RSVAPDTLGR LAEVYASYLS SRGEKERALA VLQQAEETGG GIATIPELRA KLETGGKLDS VVANASDGAA EILLNVATEL ASGGGDSYVR VYLQLARALR PHGDAVLVQL AHVAERQQDG EGAIAIYRMI EKDSPWTRFA EFQIGLNLAD LERNDEAVAH LKKVLEADPK DLRAYLALGG VYSSQKNYKA AAELYDDAVA EIPEPGREHW NIFYQRGIAY ERLKEWPKAE PNFKKALELY PDHPQVLNYL GYSWIDMNMN LEEGMELIKK AVELRPSDGY IVDSLGWAYY KLGQYDEAVE HLERAVSLRP EDAVLNDHLG DVYWRVGRHL EARYQWSQVK TLEPEPDLLA QIEEKLKNGL PPVDGEKVAD AAGNARTVSD GAPSEPARQP EQPQAQPAAP AEPAQGATAE TEATYRVKPG QSLWSIAVEE LGNGERFREI LDLNPVLRGD PNRIRPGLEL KLPTAGQ
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