| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0618 |
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| Symbol | |
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| ID | 4182401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 692818 |
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| End bp | 694560 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638066497 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_673183 |
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| Protein GI | 110632975 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.441787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCAGATTG AAAACGCCCA TTTGCGAGGT TTGTCGGTTT TCCGCCGCGG TGTGGCGGTT
GCCGGTGTCT TTTCGCTCGC GCTCAACCTG CTGATGCTGA GCGTTCCGCT CTACATGCTT
TCCATATATG ACCGAGTGTT GACGGGCAGG AGCCTGGAAA CGCTGCTCAT GCTGACGCTC
ATCGCAATAG GGGCGCTGGT CATCACCAGC GTTCTTGAGG CAGCGCGGCA ATTGATCCTG
TCGCGAACCG GCGCGAAGCT TGAGACGGTG TTGGGCGAGC GCGTCCTTGC CGCCTCGCTG
CAGGCCGGCG CGCCCGCATA TCGGGAGGTA CAGGGCCTGC GCGACCTTGG CCATCTGCGG
CAATTCATCT CCTCGCCCCT TGCTTCCGCG CTTTTCGACC TGCCGGTGGT GCCGCTTTAT
CTCTTGCTTG TCTATTTGGT TCATCCGCAG CTTGGGTGGC TTTTGGCAAT CTCGGCACTC
GCCATCCTGC TCGTTGCCGC AATCAACGAA AAACTCACCA AGGCACCGCT GGAAGATGCC
GCCGAACACG GCGCGGCCGC CCTCAGAAAA GCTCAAGCGC AGGCCCGCAA CGCCGAGGTG
ATCCGCGCCA TGGGGATGTT TTCCGCAAGC GTGGCTTCAT GGGGAGCCGA TAATGCCAAG
GCGCTGACGG CATATGACAA AGGCGCGCGG CGGAACGCGC TGCTGGGTGG CGTGAGCCAT
TTCCTGCGCC TTTTCCTGCA GATCGCCATC CTCGGATACG GCGCTTATCT GGTGCTTTCG
GATCACACGT TGAGCGCTGG CATCATCTTC GCCGCGTCGA TGATCTCGGC TCGCGCGCTA
GGACCGCTTC ACCATGCAAT CGGCGGCTGG AAATCGCTGG CTTCGGCCCG GCAGTCCTGG
CGGCGCATCC GCACGCTTTT GTCCGCAGCG CCAAGCACGA ACGTTTCCAT GCAGTTGCCA
ACGCCGCAGG CCACTCTTTC CGCAGAAAAA CTCGTGTATC AAACTTCCGG TGCGGCCGAA
CCGGTTCTCA AGGGGATCTC CTTCGAGATC GCGCCCGGCG ATATCCTGGG CGTGGTGGGC
CCGAGCGGGG CGGGAAAGTC GACGCTCGCC CGGCTTCTCG TGGGCGCCGT CGCGCCAACG
GCCGGTGTCG TGCGCGTGGG CGGTGATGAT CTGGCCAGCT GGCAGCCGGA AGCGCTCGGC
CCCTTCGTCG GATATGTGCC GCAGGACGTG GAGCTCTTCT CCGGCACCGT GGCGCAGAAC
ATCGCACGCA TGGCGGCGAC GCCCGACGCG GAAAAGGTTG TGGCGGCTGC GCAACTCGCC
AATTGCCACG ACCTCATCCA GCGCCTGCCG CGCGGCTATG ACACGATGCT TGGCCCGGAA
GGTCACGTGC TTTCAGGGGG CCAGCGGCAA AGGATTGCGC TTGCCCGCGC CTTCTATGGC
AGCCCCAGGA TCGTTGTCCT GGACGAGCCG AACGCTTCGC TCGACATCGA AGGCGAGCAG
GCGCTGATAG CGGCGCTGCA AAAAGCGCGC GCGGCGGGCA TTACCTGCGT GATCATCACA
CAGCGCAGCA GCGTCGTTCC GGCGCTGACG AAGATGTTGG TGCTGCGCGA CGGGCGCATC
GAGGCCTTCG GACCCAAGGA AGAGGTGCTT CACCGGCAGG TTCAGCCCTC GCCTGAGGCG
TCGAAAATTC CCGCCACAAA CCCGGCCACC GGCTCTCCGC TCGTGACCGC GCGGTTCGGC
TGA
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| Protein sequence | MQIENAHLRG LSVFRRGVAV AGVFSLALNL LMLSVPLYML SIYDRVLTGR SLETLLMLTL
IAIGALVITS VLEAARQLIL SRTGAKLETV LGERVLAASL QAGAPAYREV QGLRDLGHLR
QFISSPLASA LFDLPVVPLY LLLVYLVHPQ LGWLLAISAL AILLVAAINE KLTKAPLEDA
AEHGAAALRK AQAQARNAEV IRAMGMFSAS VASWGADNAK ALTAYDKGAR RNALLGGVSH
FLRLFLQIAI LGYGAYLVLS DHTLSAGIIF AASMISARAL GPLHHAIGGW KSLASARQSW
RRIRTLLSAA PSTNVSMQLP TPQATLSAEK LVYQTSGAAE PVLKGISFEI APGDILGVVG
PSGAGKSTLA RLLVGAVAPT AGVVRVGGDD LASWQPEALG PFVGYVPQDV ELFSGTVAQN
IARMAATPDA EKVVAAAQLA NCHDLIQRLP RGYDTMLGPE GHVLSGGQRQ RIALARAFYG
SPRIVVLDEP NASLDIEGEQ ALIAALQKAR AAGITCVIIT QRSSVVPALT KMLVLRDGRI
EAFGPKEEVL HRQVQPSPEA SKIPATNPAT GSPLVTARFG
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