Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0603 |
Symbol | |
ID | 4179348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 677994 |
End bp | 679010 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638066482 |
Product | type II secretion system protein |
Protein accession | YP_673168 |
Protein GI | 110632960 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4965] Flp pilus assembly protein TadB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.512211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGA GCACGGCGCT GGGGCCCACC CTCTTCCCAC TGATGGTCTT CGCATTCGCC ACGCTTAGCG TCGGCGGCGT GGCAGCCGCC CTGTTCTATC CGCAGTTCGC CAAGGCAAGC CCCTTCCGCA GGCGCTTCCA GGGCCTGGCC GCCTTGGGCG AGGAAGAGGA GAGCACCGCA CCGGCAGACG AAGACAGGGA CCGCCGCAAA TCGGTCGAGA AGACGCTGCG GGAACTCGAG GAAAAGCAGA AGGCCAAGAC AAGGAAAGCC GGAAAGCCAA CACTGAGCGG CAGGCTGCGG CAAGCCGGCC TGAGCTGGAA CAGGCGAGCC TATTTCACCG CCTGCGCGGT CTGTGGCGCC CTCACCTTTC CGGTGGCGCT TCTCCTCGGG GCGGGCAGTC TCGTTTCCGT CGGCTTTGCG CTGGCCGGGG GACTGCTGTT GCCGCATTTC TACGTGGCGA GCCGCCGCAA GCGGCGCTTC AAGCAGTTTA CCAACGAATT CTCCAATGCG GTGGACGTGA TCGTGCGCGG CCTGAAATCG GGCTTGCCGG TGGGAGACTG CCTTCGCATC ATCGCCGCCG AGGCACAGGA GCCGGTCAAA AGCGAATTTG TCGCGATCGT GCAGGACCAG ACGCTTGGCA TTTCCCTCGA CGAGGCCGTA CAGCGGCTAT GGGAGCGCGT GCCGCTTGCG GAAGCAAACT TCTTCGCAAT TGTGGTGGGC CTTCAAAGCC GGACCGGCGG CAGCCTGGCG GAAGCGCTCG GGAACCTTTC CAAGGTCCTG CGCGAGCGCA AGAAGATGAG CGCCAAGATC AGGGCTATGA GCTCGGAAGC CAAATCCTCG GCTGGCATTA TCGGCGCCCT GCCGTTCTTC GTATCGGCGG CCATCTACCT GACCAGCCCA GACTATATGT CGCTTCTGTT CAGCACCCTC ACGGGAAAGC TCGTGCTCGC AGGCTGCGCA CTCTGGATGG GCATGGGCAT CCTCGTCATG CGCAAGATGA TCAATTTCGA TTTTTGA
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Protein sequence | MDLSTALGPT LFPLMVFAFA TLSVGGVAAA LFYPQFAKAS PFRRRFQGLA ALGEEEESTA PADEDRDRRK SVEKTLRELE EKQKAKTRKA GKPTLSGRLR QAGLSWNRRA YFTACAVCGA LTFPVALLLG AGSLVSVGFA LAGGLLLPHF YVASRRKRRF KQFTNEFSNA VDVIVRGLKS GLPVGDCLRI IAAEAQEPVK SEFVAIVQDQ TLGISLDEAV QRLWERVPLA EANFFAIVVG LQSRTGGSLA EALGNLSKVL RERKKMSAKI RAMSSEAKSS AGIIGALPFF VSAAIYLTSP DYMSLLFSTL TGKLVLAGCA LWMGMGILVM RKMINFDF
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