| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0554 |
|---|
| Symbol | |
|---|
| ID | 4180074 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 613377 |
|---|
| End bp | 614201 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638066436 |
|---|
| Product | CP4-like integrase |
|---|
| Protein accession | YP_673122 |
|---|
| Protein GI | 110632914 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGACGG ATGCCGCGCT CCAGGCGCTA AAACCAAAAG ACAAAATATA CAAGGTCGCG
GATCGCGACG GCATGTATGT CTGCGTCATG CCATCAGGAG CCACATCTTT CCGGCTGGAA
TACCGGCTGC ATGGCCGACG GGAAACGGTC TATCTCGGCA AGTATGGGCG TGATGGCATC
TCTCTCGCGC GGGCGCGGGA GCTGTGCCTG GATGCAAGGC GGGCGATCAG AGAGGGACGT
TCACCGGCGA TCGAGAAGCA GCGCGAGAAG CGCCGCCTGA AGGAGGCCAA GAGCTTCGGC
GAGTTCGGCG AGAAATGGCT GGTGAATGCC CCGATGGCAG ACAGCACCAG AGCATGCGCG
CGCGCCATCT TCGAGCGTGA GCTGCTCCCT GTCTGGCGCA ATCGCCTTTA CGGAAATCAC
GCCGGACGAT CTGCGAGCGC ACTGTGCCAA GATCGTCGAG CGCGGCGCCC CGGCCACAGC
GATCCATGTT CGGGACATCC TGAAGCAGAT CTACGGCTTC GGATTCTGCA TGGAGAGAAG
GTGCCCAACC CAGCGGATGA GGTTGGACCC GCCGCGATCG CGATGTTCGC GCCGAGGGAT
CGGGCGCTCT CCCCGACCGA AATCCGGATC ATGCTGAGGC AGCTTGAGCA TGTACCGACG
CTGCCGACCA TTCGGCTGTG TATGAAATTG TTCCTGCTGA CAATGGTGCG AAAGAGCGAA
CTCCAGGATG CGGTCTGGGA CGAGGTGGAT TTTGAGAATG CTGTCTGGAC GATACCGAAG
GAGAGGATGA AGCGGTCGAC AGCCCAGGCG ACTGCCGGCA TGTAG
|
|---|
| Protein sequence | MLTDAALQAL KPKDKIYKVA DRDGMYVCVM PSGATSFRLE YRLHGRRETV YLGKYGRDGI
SLARARELCL DARRAIREGR SPAIEKQREK RRLKEAKSFG EFGEKWLVNA PMADSTRACA
RAIFERELLP VWRNRLYGNH AGRSASALCQ DRRARRPGHS DPCSGHPEAD LRLRILHGEK
VPNPADEVGP AAIAMFAPRD RALSPTEIRI MLRQLEHVPT LPTIRLCMKL FLLTMVRKSE
LQDAVWDEVD FENAVWTIPK ERMKRSTAQA TAGM
|
|---|
| |