Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0501 |
Symbol | |
ID | 4182119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 555402 |
End bp | 556382 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638066383 |
Product | conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_673069 |
Protein GI | 110632861 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0741964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGATC ATCTCCGCCG ATCCGCGAGC CGCAGCTTCC GTCTATCCGG CTCTGCGCTT TTGCTGATCT CCGGATTGGC GCTGGCCGGC TGCGCGACCA ACCGGCCGCC ACAGGTCAGC TACGACGCCG ATGTGCCGCC GCTTCCCCCT GTGCCGGCTG CCGTCACGGA GGCGCCACCA AGGCCGCTTC ACACACCGCC CGCCTGGACA CCCGCGCGCG GTGGCGCTGC CGCAGGGACG CCGGCGGGCC GCGTGGAGAA TGCCAACGCC GCCGCGCGCG TCGAACCACG CCGCGAGGGG TATTACAACT CGATCCAGAT CTATCCCTGG AGCGAGGGCG CGCTCTATCA GGTCTATGCC GCTCCCGGGC AGATCACCAA CATCGCGCTG GAACCAGGCG AGAGCCTGAC CGGCGCCGGC CCGATCGCTG CGGGCGACAC AGCGCGCTGG ATCATCGGCG ACACCGAGAG CGGCTCGGGG ATCACTCGCC GCGTCCATGT TCTCGTGAAG CCGACACGGC CAGATATCAC GACCAATCTG GTCATCACCA CCGACCGTCG CATCTACATG ATCGAGCTGC GCTCGGGCGA ACGCCCTTAT ATGCCGGCCG TCGCTTGGGC CTATCCCCAG CCGCCCGCCT CGCAGAGACA GGCAGTGCCC GCTACGCCAG TGCTCCCGGC CGTTGCGGCA CGGAACTATC GCTACGGCCT CACGGGCGAC ACGCCGCCGT GGCGGCCAAT CTCGGTCTAC GACGACGGGC GCCGCGTCTA TGTCGAGTTC CCGCGTGGGA TCGTTCAGGG CGAGATGCCG CCGCTCTTCG TCATCGGCGC AGATGGCGAA CCGCAGATCG CCAACAGCAG GATCCACCAG AACATACTGA TCGTCGACCG CCTGTTCGGC GCCGCCGAGC TCCGTCTCGG CAGTGGCGAG CGCCAGCAGA CGGTCCGGAT CGTTCGCACC GATGGGAGGC CCGCGTCATG A
|
Protein sequence | MRDHLRRSAS RSFRLSGSAL LLISGLALAG CATNRPPQVS YDADVPPLPP VPAAVTEAPP RPLHTPPAWT PARGGAAAGT PAGRVENANA AARVEPRREG YYNSIQIYPW SEGALYQVYA APGQITNIAL EPGESLTGAG PIAAGDTARW IIGDTESGSG ITRRVHVLVK PTRPDITTNL VITTDRRIYM IELRSGERPY MPAVAWAYPQ PPASQRQAVP ATPVLPAVAA RNYRYGLTGD TPPWRPISVY DDGRRVYVEF PRGIVQGEMP PLFVIGADGE PQIANSRIHQ NILIVDRLFG AAELRLGSGE RQQTVRIVRT DGRPAS
|
| |