Gene Meso_0501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_0501 
Symbol 
ID4182119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp555402 
End bp556382 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content68% 
IMG OID638066383 
Productconjugal transfer protein TrbG/VirB9/CagX 
Protein accessionYP_673069 
Protein GI110632861 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3504] Type IV secretory pathway, VirB9 components 
TIGRFAM ID[TIGR02775] P-type conjugative transfer protein TrbG 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0741964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGATC ATCTCCGCCG ATCCGCGAGC CGCAGCTTCC GTCTATCCGG CTCTGCGCTT 
TTGCTGATCT CCGGATTGGC GCTGGCCGGC TGCGCGACCA ACCGGCCGCC ACAGGTCAGC
TACGACGCCG ATGTGCCGCC GCTTCCCCCT GTGCCGGCTG CCGTCACGGA GGCGCCACCA
AGGCCGCTTC ACACACCGCC CGCCTGGACA CCCGCGCGCG GTGGCGCTGC CGCAGGGACG
CCGGCGGGCC GCGTGGAGAA TGCCAACGCC GCCGCGCGCG TCGAACCACG CCGCGAGGGG
TATTACAACT CGATCCAGAT CTATCCCTGG AGCGAGGGCG CGCTCTATCA GGTCTATGCC
GCTCCCGGGC AGATCACCAA CATCGCGCTG GAACCAGGCG AGAGCCTGAC CGGCGCCGGC
CCGATCGCTG CGGGCGACAC AGCGCGCTGG ATCATCGGCG ACACCGAGAG CGGCTCGGGG
ATCACTCGCC GCGTCCATGT TCTCGTGAAG CCGACACGGC CAGATATCAC GACCAATCTG
GTCATCACCA CCGACCGTCG CATCTACATG ATCGAGCTGC GCTCGGGCGA ACGCCCTTAT
ATGCCGGCCG TCGCTTGGGC CTATCCCCAG CCGCCCGCCT CGCAGAGACA GGCAGTGCCC
GCTACGCCAG TGCTCCCGGC CGTTGCGGCA CGGAACTATC GCTACGGCCT CACGGGCGAC
ACGCCGCCGT GGCGGCCAAT CTCGGTCTAC GACGACGGGC GCCGCGTCTA TGTCGAGTTC
CCGCGTGGGA TCGTTCAGGG CGAGATGCCG CCGCTCTTCG TCATCGGCGC AGATGGCGAA
CCGCAGATCG CCAACAGCAG GATCCACCAG AACATACTGA TCGTCGACCG CCTGTTCGGC
GCCGCCGAGC TCCGTCTCGG CAGTGGCGAG CGCCAGCAGA CGGTCCGGAT CGTTCGCACC
GATGGGAGGC CCGCGTCATG A
 
Protein sequence
MRDHLRRSAS RSFRLSGSAL LLISGLALAG CATNRPPQVS YDADVPPLPP VPAAVTEAPP 
RPLHTPPAWT PARGGAAAGT PAGRVENANA AARVEPRREG YYNSIQIYPW SEGALYQVYA
APGQITNIAL EPGESLTGAG PIAAGDTARW IIGDTESGSG ITRRVHVLVK PTRPDITTNL
VITTDRRIYM IELRSGERPY MPAVAWAYPQ PPASQRQAVP ATPVLPAVAA RNYRYGLTGD
TPPWRPISVY DDGRRVYVEF PRGIVQGEMP PLFVIGADGE PQIANSRIHQ NILIVDRLFG
AAELRLGSGE RQQTVRIVRT DGRPAS