| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0478 |
|---|
| Symbol | |
|---|
| ID | 4181113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 527590 |
|---|
| End bp | 528462 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 638066361 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_673047 |
|---|
| Protein GI | 110632839 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.164888 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGTTCA TGACCCTTTT AACGGCAGGA CTAGCGCATG GAGGACTCTA TGCGCTAGTC
GCCTTGGGAC TGGTGTTGAT CTACAAAACA CAGGGCATCG TCAACTGGGC CCATGGCGAA
TTGCTGATGG TGGGAGCCTT CTCCGGCTAT ACTGCCTTCG TGCTTGTCGG CCTCCCTTAT
CCGCTTGCCT TCCTCATCGC TGTCCTGGCC GGTGCGTTGC TAGGGGCGGT GATGGAGCGG
GTCGCCTTTC GCGGCATCGT ACATGAGCAT CATGCAACGC TTGCTTTGGT GGCGATCGGT
TTCTCCGTCA TCATCAAAGG GCTGGCGCGC ATCCCCTTTG GTGCAGACGT GTACACCTTG
CCGCCGGCCG TAGATGCCGG ACCACTTCGC TTCGCTGGCG CGATAGTCAC GGCGCAGAGT
GTCCTGACGA TCACTATTTC AGTTGGCATC GCGCTAATGC TGCTGGCGAT CTTCCGTTAC
ACCCGTACCG GAAGGCAAAT GCAGGCAACC CAACAGAACC TCAACGGCGC CCGCATCGTG
GGCGTCAATA CGGGACGGAT TTTCTCTATC ACGTGGGCGC TTGCCGCCGC CGTCGGCGCA
GTGGCTGGCC TTCTGGCTGG CCCGACCTCC CTCCTGTATC CTGACATGGG CAGTGAATTC
CTGCTGAAGG GCTTCGCAGC CGCAGTTCTC GGCGGCTTTT ATAGCGTCAC CGGGGCGATA
GTCGGCGGCT TGCTCGTTGG GGTGATCGAA ATGCTGATCG GAGGCTATAT CTCAACGGCG
TTCCAGCAGG TATCTCCGTT CCTCATCATT ATTATCGTCT TGTTCGTCCG TCCTCACGGC
CTGTTTGGAC GCCGACCGGT GGAGCGAGTT TGA
|
|---|
| Protein sequence | MGFMTLLTAG LAHGGLYALV ALGLVLIYKT QGIVNWAHGE LLMVGAFSGY TAFVLVGLPY
PLAFLIAVLA GALLGAVMER VAFRGIVHEH HATLALVAIG FSVIIKGLAR IPFGADVYTL
PPAVDAGPLR FAGAIVTAQS VLTITISVGI ALMLLAIFRY TRTGRQMQAT QQNLNGARIV
GVNTGRIFSI TWALAAAVGA VAGLLAGPTS LLYPDMGSEF LLKGFAAAVL GGFYSVTGAI
VGGLLVGVIE MLIGGYISTA FQQVSPFLII IIVLFVRPHG LFGRRPVERV
|
|---|
| |