Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_0357 |
Symbol | groEL |
ID | 4181956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 399629 |
End bp | 401263 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638066239 |
Product | chaperonin GroEL |
Protein accession | YP_672926 |
Protein GI | 110632718 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
TIGRFAM ID | [TIGR02348] chaperonin GroL |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTGCAA AAGACGTAAA ATTTTCCCGT GATGCCCGCG AGCGTATGCT TCGCGGCGTC AACATCCTTG CCGACGCGGT GAAGGTGACG CTCGGCCCGA AGGGCCGCAA CGTCGTGCTC GACAAGTCCT TCGGCGCCCC GCGCATCACG AAGGACGGCG TGACCGTCGC CAAGGAAATC GAGCTTGAGG ACAAGTTCGA GAATATGGGC GCCCAGATGG TGCGCGAAGT GGCGTCGAAG ACCAACGACA TCGCCGGCGA CGGCACCACG ACGGCCACCG TTCTCGCCCA GGCGATCGTA CAGGAAGGCG CAAAGGCCGT TGCCGCCGGC ATGAACCCGA TGGACCTGAA GCGCGGCGTT GATCTGGCCG TTGCCGAAGT CGTCGATTAC CTGGCCAAGG CGGCCAAGAA GATCAAGACC TCCGAAGAGG TTGCCCAGGT CGGCACGATT TCCGCCAATG GCGAGAAGGA AATCGGCCAG ATGATTGCCG AGGCCATGCA GAAGGTCGGC AATGAGGGCG TGATTACTGT CGAGGAAGCC AAGACCGCCG AGACCGAGCT TGAAGTGGTC GAGGGCATGC AGTTCGACCG CGGCTATCTC TCTCCGTACT TCATCACCAA CCCGGAGAAG ATGGTGGCGG AGCTCGAGGA CGTTTACATC CTCCTGCACG AGAAGAAGCT CTCCAACCTC CAGGCCATGC TGCCTGTGCT CGAAGCTGTG GTGCAGTCGG GCAGGCCGCT GCTTATCATC GCCGAGGACG TCGAGGGCGA GGCTCTCGCC ACGCTGGTGG TCAACAAGCT GCGTGGCGGC CTGAAGATCG CAGCCGTGAA GGCACCGGGC TTCGGCGACC GCCGCAAAGC CATGCTCGAA GACATCGCGG TCCTCACGGG CGGCCAGGTG ATCTCCGAAG ATCTCGGCAT CAAGCTCGAG AACGTCACGC TCGACATGCT GGGCCGTGCC AAGCGCGTTT CCATCGCCAA GGAGACGACC ACCATCGTTG ACGGTGCCGG CCAGAAAAGC GAGATCGAAG GCCGCGTTGC CCAGATCAAG TCGCAGATCG AGGAGACCAC CTCCGATTAC GACCGCGAGA AGCTGCAGGA GCGCCTGGCC AAGCTCGCCG GCGGCGTCGC GGTGATCCGC GTCGGCGGTG CGACCGAGGT AGAGGTGAAG GAGAAGAAGG ACCGCGTGGA CGATGCGCTA AACGCCACCC GCGCGGCCGT CGAGGAAGGC ATTGTTCCGG GCGGCGGCAC CGCACTTCTG CGCGCCTCCA GCGAAATCAA GGCCAAGGGC GAGAATGCCG ACCAGGAGGC CGGCGTGAAC ATCGTTCGCC GCGCAATCCA GGCTCCTGCC CGCCAGATCG CTTCGAATGC GGGCGCCGAG GCTTCGATCG TCGTCGGCAA GATTCTCGAC AACAACGCCG TCACGTTCGG TTACAATGCC CAGACGGGCG AATATGGCGA CATGATCGGC ATGGGCATCG TGGACCCGAT GAAAGTGGTC CGCACCGCTC TTCAGGACGC GGCTTCGGTC GCCGGCCTGC TGATCACCAC CGAGGCCATG ATCGCCGAGC TGCCGAAGAA GGACTCGCCG GCCCCGGCGA TGCCAGGCGG CGGCATGGGC GGCATGGATT TCTAA
|
Protein sequence | MAAKDVKFSR DARERMLRGV NILADAVKVT LGPKGRNVVL DKSFGAPRIT KDGVTVAKEI ELEDKFENMG AQMVREVASK TNDIAGDGTT TATVLAQAIV QEGAKAVAAG MNPMDLKRGV DLAVAEVVDY LAKAAKKIKT SEEVAQVGTI SANGEKEIGQ MIAEAMQKVG NEGVITVEEA KTAETELEVV EGMQFDRGYL SPYFITNPEK MVAELEDVYI LLHEKKLSNL QAMLPVLEAV VQSGRPLLII AEDVEGEALA TLVVNKLRGG LKIAAVKAPG FGDRRKAMLE DIAVLTGGQV ISEDLGIKLE NVTLDMLGRA KRVSIAKETT TIVDGAGQKS EIEGRVAQIK SQIEETTSDY DREKLQERLA KLAGGVAVIR VGGATEVEVK EKKDRVDDAL NATRAAVEEG IVPGGGTALL RASSEIKAKG ENADQEAGVN IVRRAIQAPA RQIASNAGAE ASIVVGKILD NNAVTFGYNA QTGEYGDMIG MGIVDPMKVV RTALQDAASV AGLLITTEAM IAELPKKDSP APAMPGGGMG GMDF
|
| |