| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_0286 |
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| Symbol | fliF |
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| ID | 4182846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 324206 |
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| End bp | 325843 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638066167 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_672855 |
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| Protein GI | 110632647 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.722484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCTGAGC AGCTTCGAAC CATTGTCGAA AACCTGAGGG CGCTTGGCCC TCGCCGGCTC
GCCATGATGG GTGGAGTTCT CGCGCTCACC TTGGCGGTGG TGACAGGGGG CGCGATCTAC
CTCAACCGCC CGGCCTATGA GACGCTCTAT GTCGGGCTGG AAAGGTCGGA CGTAAATCAG
ATCGGCCTTG TTCTGGGCGA GGCGGGAATC CGATTCGATG TCGTATCGGA TGGAACGGCG
GTGCTGGTGC CGACCGGGAA GACCGCGGAG GCACGCATGC TTCTCGCGGA AAAGGGCCTG
CCCTCCAGCG CCAATGCCGG CTATGAGCTA TTCGACACCG TGGGCTCGCT TGGGCTCACC
ACTTTCATGC AAGAGGTCAC CCGGGTTCGC GCGCTCGAAG GCGAGATCGC ACGCACGATC
CGCTCCATCG CCGGCATCAG GGCCGCCCGC GTGCATATCG TCATGCCTGA GCGCGGCAAC
TTCCGCCGCG AAGGACAGGA GCCTTCCGCC TCTGTCGTCA TCCGCACATC CGGCATCGAC
GGGGCCGCGA AAGCTGCAAG CATCCGCTAT CTGGTCGCGG CTGCGGTGCC GGGCCTTAGT
GCGGAGAAAG TGACCGTCCT CGACTCCTCA GGCATGCTGC TTGCGGCAGG CGACGACCCG
GCAAACAACA CTGCCCAGCG CTCCATCGGC ATCGAACGCA CGGTTGAAGC ACAGGTGGAA
GAGAATATCC GCCGCGCACT GGCACCCTAT CTTGGCCCCG ACAATTTCCG CGCAAGCGTG
AAAGCGGAGG TCAATACCGA CACACGGCAG GTGGAGGAAG TGATCTTCGA TCCGGATTCC
CGCGTGGAGC GTTCGGTTCA GATCGTGCGC ACGGCAGACA GTGCAACGCG GGAGACCGCG
GCGACACCCA CCACCGTGTT GCAGAACCTG CCGCAGGAAG AACCAGCCCC GGCCGAACTG
CCCCGCTCCT CGGAAGAGAG CGAGCGGCGA GAGGAAACGA CCAATTACGA GCTCAATACG
AAGCGCATCG CCACCTCCAG CAACGGCTAT CAGGTCACAC GGCTGTCCAT TGCTGTCGTG
GTAAACGAGG GGCGTCTTGC CGCCATTCTC GGCGACAACG CAGCGCCGGA TGCTCTGCAG
ACTCGCATCA GGGAGATTGA GACGGTCGTT GCTTCTGCCG CTGGCCTTAA CGAGACGCGC
GGAGACGTGC TGAATGTGGC AGCCGTCGAG TTCGTCGACG GGCTGGATGG CGTCGAAATG
GCGGAGCCTG GCCCATTGGC CGCATTGGGC AGGCATTCCG GGACGATGAT CAATGCACTG
GCCTTCGTGC TCGCCGCCTT TTTCATCACC TGGTTTGGGC TTAGGCCACT TGCCACTGCA
CTCACGCGCG GCCCAGAAAT CGAAGCATCC GCTGCAGGAG AAGAAATTCA GGCACTTTCG
CAGGAAGGGG CTGACGAGCG GCTGGCGCTG ACCGCCGGGA ATGGCGTCCA AAGTTCGGAA
GAGGCGAACG ATGAGCCGCA GTTGAAGATA AAGCCGGCGC CGCAGGCCCT GCTCGCACGC
ATGGTCGACC TCAATGAGGA ACGGACCGCG GACATCCTCC GCAAATGGGC GAGAGCGGAA
GTGGAGGCCG CGGGCTGA
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| Protein sequence | MPEQLRTIVE NLRALGPRRL AMMGGVLALT LAVVTGGAIY LNRPAYETLY VGLERSDVNQ
IGLVLGEAGI RFDVVSDGTA VLVPTGKTAE ARMLLAEKGL PSSANAGYEL FDTVGSLGLT
TFMQEVTRVR ALEGEIARTI RSIAGIRAAR VHIVMPERGN FRREGQEPSA SVVIRTSGID
GAAKAASIRY LVAAAVPGLS AEKVTVLDSS GMLLAAGDDP ANNTAQRSIG IERTVEAQVE
ENIRRALAPY LGPDNFRASV KAEVNTDTRQ VEEVIFDPDS RVERSVQIVR TADSATRETA
ATPTTVLQNL PQEEPAPAEL PRSSEESERR EETTNYELNT KRIATSSNGY QVTRLSIAVV
VNEGRLAAIL GDNAAPDALQ TRIREIETVV ASAAGLNETR GDVLNVAAVE FVDGLDGVEM
AEPGPLAALG RHSGTMINAL AFVLAAFFIT WFGLRPLATA LTRGPEIEAS AAGEEIQALS
QEGADERLAL TAGNGVQSSE EANDEPQLKI KPAPQALLAR MVDLNEERTA DILRKWARAE
VEAAG
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