Gene Meso_0062 details

Gene Information

• Locus tag: Meso_0062
• ID: 4179506
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: -
• Start bp: 84734
• End bp: 86626
• Gene Length: 1893 bp
• Protein Length: 630 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 638065940
• Product: major facilitator transporter
• Protein accession: YP_672632
• Protein GI: 110632424
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG2814] Arabinose efflux permease

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAGTTG CATCGACGGT CGATACCGGC CAGCGCGGCA TGACGCGCGA GGAAAAGAAG 
GTCATCTTCG CCTCCTCGCT CGGCACGGTA TTCGAGTGGT ATGATTTTTA TCTCTATGGG 
TCGCTCGCCG TCTTCATCGG CGCTACCTTC TTCAGCCAAT ATCCCGAGGC TACGCGGAAC 
ATCTTTGCGC TGCTGGCCTT TGCAGCGGGC TTCCTGGTGC GGCCCTTCGG GGCCCTGGTT 
TTCGGCCGCA TCGGCGATCT CGTGGGACGA AAATACACGT TCCTGATCAC TATTGTGATC 
ATGGGTCTTT CAACCTTTCT CGTGGGCCTG CTGCCCGGCT CCGCCTCGAT CGGCATTGCC 
GCGCCAATCA TCCTTATTGC GCTACGCATG CTGCAAGGCC TGGCTCTCGG CGGCGAATAT 
GGCGGCGCAG CCACCTATGT CGCCGAGCAC GCGCCGGATA ACAGGCGCGG CTATTACACG 
TCGTGGATCC AGACCACGGC GACACTCGGC CTCTTTCTTT CGCTCATCAT AATCCTGCTG 
GTGCAAGCCT CCATGGGTCG AGAAGCTTTC ACCGCCTGGG GCTGGCGCAT ACCTTTCCTG 
CTCTCCTTCA TCCTGCTCGC GATATCAGTC TGGATCCGGC TCTCACTCAA CGAATCGCCG 
ACTTTCCAGC GCATGAAGGA AGAAGGCAAA GGCTCCAAAG CGCCCCTGTC GGAGGCCTTC 
GGCCAGTGGA AGAACGCCAA GATAGCGCTC CTGGCGCTGC TCGGCCTGAC GGCGGGCCAG 
GCAGTGGTTT GGTACAATGG CCAGTTCTAC GCGCTCTTCT TCCTGCAGAA CGTGCTCAAG 
GTCGACGCCC AGTCCGTCAA CATCATGATC GCCCTTTCGC TGGCGCTCGC CACGCCCTTC 
TTCATTTTCT TCGGCTGGCT GTCGGACAAA GTGGGCCGCA AGGTGATCAT CATGGCCGGG 
CTGGCGCTCG CCATCGTCAC CTATTTTCCG CTGTTCAAGG CGCTCACCTG GGCCGCTAAT 
CCCGCTCTTG CCCAAGCTCA GGCGCAGGTG CGGGCTACTG TCACCGCCGC TCCGGGCGAC 
TGCAAGTTCC AGTTCAACCC GACTGGCACG GCGAAATTCA CGACCTCCTG CGACATCGCC 
ACTTCGTTCC TGACACGTAC TTCCGTGCCG TATGACGTGG CGCTGACCGC GCCAGCGGGC 
ACACCAGCAA CGGTGCAGAT CGGCAATGCA ACAACCATCG AGTCCTATGA CGCCGTCGCG 
GCAGGCGCCG ACGCGCGGGC AAGGGAGTCT GCCTTCGCAC ATTCCGTCAA CCTTGCGCTG 
CAACAGGCAG GGTACCCGTT GGTTCGCGAT CCCGCCAGGG TAGCAGAGCC GAAGCTCGAC 
GCCTTCATTG CTGCCAATCC GGAGCTTAAC CTCGATGCAG CGGCCATCCG AGGCAGCCAG 
GGCGCTACGG TGCCGGCGGA GCAGGCGGTG GAAGATGGGT TGCTGACGGC CGCGGAAGCC 
GCGGCAGCCG GCAATGAGGT GGCCGTTTAC ACCATTCCCG GTGCAGGTGC GTTCAAAATG 
GTGGCAAATC CGGAGGCGGT GAACTGGCCG CTGGTCATCG GCATCCTGTT CATACTGGTC 
GTCTATGTGA CCATGGTCTA CGGCCCGATC GCCGCGATCC TGGTGGAAAT GTTCCCGACC 
CGCATCCGCT ACACCGGCAT GTCATTGCCA TACCACATCG GCAATGGCTG GTTTGGCGGG 
CTGCTGCCGG CAACGGTTTT CGCCATGAGT GCCTATCGGG GCGATATCTA CTTCGGCCTC 
TGGTATCCGG TCGCCGTGGC CGCGATGTCG CTCATTATCG GCACCTTGTT CATACGGGAC 
ACGCTAGGCA CCAATCTAAA TACCAAGGAG TAG 

 

Protein sequence

MTVASTVDTG QRGMTREEKK VIFASSLGTV FEWYDFYLYG SLAVFIGATF FSQYPEATRN 
IFALLAFAAG FLVRPFGALV FGRIGDLVGR KYTFLITIVI MGLSTFLVGL LPGSASIGIA 
APIILIALRM LQGLALGGEY GGAATYVAEH APDNRRGYYT SWIQTTATLG LFLSLIIILL 
VQASMGREAF TAWGWRIPFL LSFILLAISV WIRLSLNESP TFQRMKEEGK GSKAPLSEAF 
GQWKNAKIAL LALLGLTAGQ AVVWYNGQFY ALFFLQNVLK VDAQSVNIMI ALSLALATPF 
FIFFGWLSDK VGRKVIIMAG LALAIVTYFP LFKALTWAAN PALAQAQAQV RATVTAAPGD 
CKFQFNPTGT AKFTTSCDIA TSFLTRTSVP YDVALTAPAG TPATVQIGNA TTIESYDAVA 
AGADARARES AFAHSVNLAL QQAGYPLVRD PARVAEPKLD AFIAANPELN LDAAAIRGSQ 
GATVPAEQAV EDGLLTAAEA AAAGNEVAVY TIPGAGAFKM VANPEAVNWP LVIGILFILV 
VYVTMVYGPI AAILVEMFPT RIRYTGMSLP YHIGNGWFGG LLPATVFAMS AYRGDIYFGL 
WYPVAVAAMS LIIGTLFIRD TLGTNLNTKE